Gene SO_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2285 
Symbol 
ID1170014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2399602 
End bp2400228 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID637344131 
Producthypothetical protein 
Protein accessionNP_717881 
Protein GI24373838 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCC AACTTATCAA TGATCCGAAG CTATGGACGT TAATGGTCTC TGCTGCATTC 
TTTTGTGCAA CGATGACCAT GACACCCGGT CCAAATAATA TTTTACTTGC CAGTTCCGGC 
GCCCATTTTG GCGTAATGCG AACTCTTCCT CATATCGCGG GCATCCGTTT GGGCTCAACT 
TCACTGCATC TTTCTGTCTT ACTTGGCCTT GGCGCTTTAT TCGAGGTATT TCCTTATTTG 
CATCATATTC TTAAATATGC CGCATTGTTG TATTTGCTAC ATCTTGCCTA TCGTTTGGTC 
ACGTCTCCGG TGAACGCGGC TCATTTAGAT GAGGGGCGTA AGCCGATGAG CTTAATGGAG 
GCAGCATTGT TCCAGTGGAT TAATCCAAAG TCATGGATGT CGACGATTAC CCTTTGTAGC 
GCTTTTACTT TGGGTGGCGA AGGGTTTTGG CTAAGTGCTT TATTGGGTGT GCTAGTGTTT 
AATTTGGTGG GCTTTCCCGC CTCATTTACT TGGGTGTTTG TTGGCGCTGC AATCAGCAAA 
ACGTTGAATA CCGATAAACG TCGCCGCCAC TTTAACTGGT TTATGGGCAG TTTACTGTTG 
GTCTCACTGC CAATGATCCT GCGGTAA
 
Protein sequence
MDIQLINDPK LWTLMVSAAF FCATMTMTPG PNNILLASSG AHFGVMRTLP HIAGIRLGST 
SLHLSVLLGL GALFEVFPYL HHILKYAALL YLLHLAYRLV TSPVNAAHLD EGRKPMSLME 
AALFQWINPK SWMSTITLCS AFTLGGEGFW LSALLGVLVF NLVGFPASFT WVFVGAAISK 
TLNTDKRRRH FNWFMGSLLL VSLPMILR