| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2174 |
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| Symbol | |
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| ID | 1169912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2285015 |
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| End bp | 2285977 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637344033 |
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| Product | cyclic nucleotide phosphodiesterase, putative |
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| Protein accession | NP_717774 |
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| Protein GI | 24373731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA TCAAAAACGT TCATAATCAA GCCTTTGAAG CCATTCATAC CATCCTTAAT
AGTCTAGATG CTCTGGTCTA CGTTTCGGAT TTACACACCT ATGAACTACT GTATTTGAAT
GATTATGGTA CGACCATTTG GGGCGAACCC ACAGGTAAAA AATGCTATCA GCTACTACAA
GCTGGGCAAA ATAGCCCCTG CTCTTTTTGC ACAAACCACA AACTGATTAA TCATGCAGGC
AACAGTACCA CAGTACACGT GTGGGAATTT AAAAATACTT ACAATAATCG TTGGTATCAA
TGTCGTGATC AGGCCATTCG CTGGACAGAT GGTCGACTAG TACGGATTGA AATTGCAACC
GACATTACCG ATCGCAAACA AATGGAAGAG GCGTTAATCG AGGCAAAATC CACTGCCGAG
CGTCTTGCAA ATACCGACGA ACTGACAAAA CTCTACAACC GTCGCGCCTT TTTCAATTTA
GGCCTTTCCA TAGCACAACA ATCAGGACAG GCATTAGCGT TTATCATGTT TGATATTGAC
CGTTTCAAGC ACGTCAATGA TCGATGGGGA CATACTACAG GCGATGCCGC GCTTATTCAT
ATTGCGAAGC TCACTCAAGC CATCCTTAAA CCAGTAGATA TTCTTGGGCG CCTTGGCGGT
GAAGAATTTG GCATACTCTT ACCCGACTTA CACCACGAAC AAGCATGCCA ACTTGCAGAA
TCAATTCGCT GTCGCTTTGA AGAACAGCCA CTTGCTCTTA ATGGCCAAAT CATCAAATGC
ACCGCAAGCT TTGGCATTGC ATCAATCACA ATCCCTGTCA TTCATTCCGA GAAAGAAGCA
CAAAACCTTC TGGAAACACT CTTCAACAGT GCAGACCAGG CCATGATGCA AGCCAAGCGA
AATGGGAGAA ATCAAGTCTG CAGTGCAACT GAACTGGCGA ATTTTGCTCA AAATAATCAC
TAA
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| Protein sequence | MTMIKNVHNQ AFEAIHTILN SLDALVYVSD LHTYELLYLN DYGTTIWGEP TGKKCYQLLQ
AGQNSPCSFC TNHKLINHAG NSTTVHVWEF KNTYNNRWYQ CRDQAIRWTD GRLVRIEIAT
DITDRKQMEE ALIEAKSTAE RLANTDELTK LYNRRAFFNL GLSIAQQSGQ ALAFIMFDID
RFKHVNDRWG HTTGDAALIH IAKLTQAILK PVDILGRLGG EEFGILLPDL HHEQACQLAE
SIRCRFEEQP LALNGQIIKC TASFGIASIT IPVIHSEKEA QNLLETLFNS ADQAMMQAKR
NGRNQVCSAT ELANFAQNNH
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