| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2162 |
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| Symbol | |
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| ID | 1169903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2274632 |
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| End bp | 2277142 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344024 |
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| Product | tonB dependent receptor-related protein |
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| Protein accession | NP_717762 |
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| Protein GI | 24373719 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAT TTAAACCCAG CTTGCTGACC TTAGCATTCG TTGCTGCGGG CGCCAGTATC
CACGCCTACG CAGCTGATGC TGCCACAGAA AAAGACGTAA AAGCCAAAGA TGCCGAAATT
GAAGTGATAC AAATTAAAGG CTTCAGAACC AGTGTAATCA AATCGCTCAA TGATAAACGT
TTTGGCGATA CCGTATCTGA ATCTATCTCT GCCGATGATC TTGGTGCACT ACCCGACCAG
TCTATTGCCG ACGCTTTGAC CCGTTTACCC GGCGTCACCG CGGTACGTAC TGGCGGTCAA
GCCAGCGGTC TTAATATCCG CGGTCTAGAT GGTGATTTTG TGTTTGCCAC TCTAAATGGC
CATGAACAAG TCACCACTGG CGGTAAACGC GCCATTGAGT TTGACCAATA TCCATCAGAA
TTAATCAGCC AAGCTGCTGT TTATAAATCA CCAAAAGCCT CGCTCATTGA GGGTGGCGTT
GCGGGTACTG TTGAATTAAA AACCGCTGAT CCACTTAAAA GTGACAAAGA TCATTCCGTT
AATATCAATG CTCGCGGCAG CTTTAACGAT CGCGCCGATG AAATCTCCGA CGCTGAGCAG
TACGGTAATC GTTTAAGCCT CGCCTACCAA GGTAAATTCC TCGAAGATAC ATTAGGAGTG
GCAGTCGGTT ATGCTCACTT GTATCAGCCA TACGTTGCTA GCCAATTCAT TGGCTTACGT
TTTAATGATG CTAATGAAGA TGTAAACGGT GACGGTGTCA AAGAAGCAAT TAGCGAAGGT
TTTGAACTAC AACAAAAAGG GGGTGACGAT ACTCGCGATG GTTATATGGC CGCGATTCAT
TGGCAACCCA CTGATAACTT TAGCGTAAAA GGCGATCTTT TCCATTCAAA ATTTACCTCG
GAGAACTTCG CCCGTGGTTT CCGAGTTAAA TCACTGAAAA ATGGAACAAT TAGTGATGCT
GTTGTTGAAA GTGGTTCGAT GACAGGCGGT ACTGTTTCAA CCGATGGTAC TGATAACTTT
GCCGTTTTCG TAGTTAATGA TAACGACTCA AAATACTCAG AACTGACTTC AGGTTCTTTC
AATGTTGAGT GGAATAACGG CGGCGCGTTA ACGGTTGCAG CCGATGTCAG CTATTCCAAA
GCCGATGGGG AATTCGTTAA TGGCGGTACC CGCGCAGTGT TATACGACGA CATTGGTAAT
GAAGTCCGTT CAGCAGAATC GGTAACATAC AAGCTCAATG GTTTAAGCCC TGCGGATATC
AGCTTTGCCA ATGATTACAC CAATACCGCC ACTCTGGGCC TAAAAGAAGT GGGAATGTGG
CCATATAATC AGCAAAACGA TCTGGTTGCC TACAAACTCG ACTTTAACTA TGCCTTAGAC
ATGGGCTTTG TTTCATCGGT TGATTTTGGT GTGCGCTACG CTGAGCGCGA GTTCAACGCC
CAACGTTCAC AAGCAGGCTA TGGTTTTGAA TATGGTAAAA ACCCAAGCAA CCAACCTGTT
CTTGCCCTTA ACGGGGATAT GGCAAAAGTT GTTGATTTTG GCGGAGAGTT GTCAGGATAT
CCAAGCTTCC TTGCCATCGA CTTTAACAAA GCGATTGAAC TCGTAAATGC GCAGTTGGCC
GCGACAGGTC AATCTCCCTT TACCCCAACC GCAAACTGGT CGAATAACTG GACCATGATC
CAAAGCGGCG CGGTAAACGA AGATGTATTA GCGGGATATG TGCAAGCAAA CTTAGACTTT
GATATCGGAG ATATCAAAGT CACAGGTAAC CTAGGTGTCC GTGTTGTTAA TACCGATCAA
AGCAGTACCG GCTTACAGCA AGTAGGGTAT GGCTTAGGCG AAGCGATTAC TGATGAGCTG
GGGGTTGTGA GTAAGGATTA TATCCGCAAT GAAGTCGGTA AAACCTATAC CGATTACCTG
CCATCACTTA ACTTAACCTT CCATTTGACT GAAAACGATC AACTGCGTTT TGCTGCGGCA
TCAGTGATGT CACGTCCTCC GATTAACAAA TTAAAGTCGG GTATGGGTTC TTGGTATGAC
GATTCGGCGA CACCCGGATA TAAAAAGTAC AATGCATGGG GTAACACCAG TCCGTTGTTA
GATCCTTTCT ATGCGGATCA ATATGACCTA TCTTACGAGC ACTTCTTTGA AGAATCTGAA
GGTGCTGTCG TTGTTGCCTT GTTCTATAAA GATATTAAAT CTTTCATTAA CGATTTCACT
ATTCAACCAT TCGATTTTGA AGCAAATGGC TTTATCGTAC CCGATACCAT TATCGACAAT
GGTGTTGAGT TCCCTGTGAT TAAAAATGAA GGTCAATATC AAACGGCAAT CAACAACGAT
AAAGGCGGTT ATATCCGTGG TATCGAGTTA GGCTATACCC AAATATTTGA TTTCCTACCA
TCTCCATTGG ATGGTTTAGG CTTCACCGGT AGCTATTCAT ATTCGGACAG TGAGGTGGAA
TTAACCACCG ATTTAAGTGG TTCAAACCTA ATTATGCCAT TGCCCGGGTA A
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| Protein sequence | MMRFKPSLLT LAFVAAGASI HAYAADAATE KDVKAKDAEI EVIQIKGFRT SVIKSLNDKR
FGDTVSESIS ADDLGALPDQ SIADALTRLP GVTAVRTGGQ ASGLNIRGLD GDFVFATLNG
HEQVTTGGKR AIEFDQYPSE LISQAAVYKS PKASLIEGGV AGTVELKTAD PLKSDKDHSV
NINARGSFND RADEISDAEQ YGNRLSLAYQ GKFLEDTLGV AVGYAHLYQP YVASQFIGLR
FNDANEDVNG DGVKEAISEG FELQQKGGDD TRDGYMAAIH WQPTDNFSVK GDLFHSKFTS
ENFARGFRVK SLKNGTISDA VVESGSMTGG TVSTDGTDNF AVFVVNDNDS KYSELTSGSF
NVEWNNGGAL TVAADVSYSK ADGEFVNGGT RAVLYDDIGN EVRSAESVTY KLNGLSPADI
SFANDYTNTA TLGLKEVGMW PYNQQNDLVA YKLDFNYALD MGFVSSVDFG VRYAEREFNA
QRSQAGYGFE YGKNPSNQPV LALNGDMAKV VDFGGELSGY PSFLAIDFNK AIELVNAQLA
ATGQSPFTPT ANWSNNWTMI QSGAVNEDVL AGYVQANLDF DIGDIKVTGN LGVRVVNTDQ
SSTGLQQVGY GLGEAITDEL GVVSKDYIRN EVGKTYTDYL PSLNLTFHLT ENDQLRFAAA
SVMSRPPINK LKSGMGSWYD DSATPGYKKY NAWGNTSPLL DPFYADQYDL SYEHFFEESE
GAVVVALFYK DIKSFINDFT IQPFDFEANG FIVPDTIIDN GVEFPVIKNE GQYQTAINND
KGGYIRGIEL GYTQIFDFLP SPLDGLGFTG SYSYSDSEVE LTTDLSGSNL IMPLPG
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