| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1916 |
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| Symbol | |
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| ID | 1169679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2016443 |
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| End bp | 2017324 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343802 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_717523 |
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| Protein GI | 24373480 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAC GCCAACTTAA ACACTTAGAT GCACTTGCTA TTACTGGCAG TTTTACCGCC
GCGGCCAAAA AACTCAATAT GGCGCAACCC GCGCTAAGCC AAAGTATTAA ACGGCTCGAA
CTATCCCTTG GCGTCACCCT GATCAACCGC ACCAGCAATA AGCACGATAA ACACCTCGCA
CTCACTGCCG AAGGCTTAGT GTTACACCAA CATGCCACCT TGATCCTCAA ACAAATTAAA
CAGGCCGAAG CGCAAATTCG CGCAATGGCG AATTTGACCT CAGGTGAAGT ACGCATTGCC
GTGCCGGGCA TGTTGGGTTC TTTTTACCTA CCTTCACGAC TCATGGCCTT TCGCCATCAA
TATCCAGAGT TAAAGCTTTC CCTCTTTGAG GGCGGCACCC GTGACGCGCT GCGAATGTTG
CAACAGGAAG AAGTGGATAT CGCCATTATT ACCGCCCAAG ATCTGCAACC CGACTTTGAT
AGTCAGCTAT TGATCCGCGA GCAAATGGTT ATTGCCATGG GCGCCGAGCA TCCACTCGCA
GAGCTTCCCG CTGTGAGCTT AAACGACTTC TTTGACCATG AACTGGTAAT GTTCAAAACT
GGCTACTTTC ACCGCGAGTG GATCCTCTCT CAGGCAAAAG ACTTGGGTAA AAAACCCAAT
ATTGCCTTTG AAACCAATCT GATTAACTTG ATCAAACAAA TTGTGTCGCA GGGATTTGGT
ATCACAAGCG TGCTCGAAAT GGCTATCAGT CCTAAGGATG ACATCCTCGC GAAACCCTTT
GACCCACCGG TATTTTTAAA TCTGCATATC GCCTGGAAAA AGCAGCGCCC CGTGAGTCAA
GCCGACCGCG CCTTTGTGGA ATTTTTGATG AAAAATCGAT AA
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| Protein sequence | MDIRQLKHLD ALAITGSFTA AAKKLNMAQP ALSQSIKRLE LSLGVTLINR TSNKHDKHLA
LTAEGLVLHQ HATLILKQIK QAEAQIRAMA NLTSGEVRIA VPGMLGSFYL PSRLMAFRHQ
YPELKLSLFE GGTRDALRML QQEEVDIAII TAQDLQPDFD SQLLIREQMV IAMGAEHPLA
ELPAVSLNDF FDHELVMFKT GYFHREWILS QAKDLGKKPN IAFETNLINL IKQIVSQGFG
ITSVLEMAIS PKDDILAKPF DPPVFLNLHI AWKKQRPVSQ ADRAFVEFLM KNR
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