Gene SO_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1807 
SymbolpspA 
ID1169580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1897828 
End bp1898511 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID637343694 
Productphage shock protein A 
Protein accessionNP_717415 
Protein GI24373372 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID[TIGR02977] phage shock protein A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATTT TCTCTCGTTT CGCCGATATC ATTAACTCTA ATATCAGCGC ATTACTCGAC 
AAAGCCGAAG ACCCTGAAAA AATGGTTCGC CTGATCATCC AAGAAATGGA AGATACACTG 
GTAGAAGTGC GTTCAACCTC AGCAAAAGTA TTGGCTGAAA AGAAAGAATT GCATCGCCGT 
ATCAGCCGAG TTGAGGAGCA AGTTCAGGAT TGGCAGGATA AAGCGGAACT GGCTCTTTCA 
AAGGACCGCG AAGATTTAGC CAAAGCGGCT TTAGTTGAAA AACAAAAAGC GGCTGGTTTA 
GTGGATACCT TAAACCAAGA GTTGGCGGTG CTGGATGAGC ATATCGCTCG TTTAAAAGAC 
GAAGTGAGCC TGCTGCAGGA AAAACTGTTA GACGCAAAAG CGCGCCAAAA AACCATTATT 
TTGCGCACTC AAACAGCGTC ATCACGTTTA GAAGTGAAAA AGCAGTTAGA CTCAAGCAAA 
ATTGATAATG CCATGCTTAA GTTTGAGCAA TATGAGCGCC GTGTTGAAGG ATTAGAAGCA 
CAAGTTGAAT CCTACGACCT TGGCAGCAAA AAGACGTTAG CTGACGAGTT TGCGGCATTA 
GAAGCTGAAG ATTCAGTCAA TGCCGAGCTG GAGGCGCTCA AGGCAAAAGT GAAAGGCAAA 
GCCCCCACTA AGTCAAAAGA ATAA
 
Protein sequence
MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELHRR 
ISRVEEQVQD WQDKAELALS KDREDLAKAA LVEKQKAAGL VDTLNQELAV LDEHIARLKD 
EVSLLQEKLL DAKARQKTII LRTQTASSRL EVKKQLDSSK IDNAMLKFEQ YERRVEGLEA 
QVESYDLGSK KTLADEFAAL EAEDSVNAEL EALKAKVKGK APTKSKE