| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1779 |
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| Symbol | omcA |
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| ID | 1169553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1861690 |
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| End bp | 1863897 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637343665 |
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| Product | decaheme cytochrome c |
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| Protein accession | NP_717388 |
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| Protein GI | 24373345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC GGTTCAATTT CAATACCGCA ACAAAAGCGA TGTTGGGTGC CGGTTTACTT
TCACTCCTTC TCACTGGCTG CGGTGGCAGT GATGGTAAAG ATGGTGAAGA CGGTAAACCA
GGCGTTGTTG GAGTTAATAT CAACTCAACC TCAACCTTAA AAGCAAAATT CACTAATGCC
ACTGTTGATG CAGGTAAAGT CACTGTCAAC TTCACCCTAG AAAATGCCAA TGGTGTAGCA
GTATTAGGCT TAACCAAAGA TCACGATTTG CGATTTGGTA TTGCGCAATT AACTCCCGTT
AAAGAAAAAG TGGGAGAAAC AGAAGCTGAC CGCGGTTATC AATGGCAAGC TTATATCAAT
GCCAAGAAAG AACCCGGTAC CGTTCCATCA GGCGTTGATA ACCTCAATCC ATCGACCCAG
TTTCAAGCGA ACGTTGAGTC TGCCAATAAA TGCGACACTT GTTTAGTAGA CCATGGCGAT
GGTAGCTACA GTTATACATA CCAAGTTAAC GTTGCCAATG TGACTGAGCC GGTAAAAGTC
ACTTACAGTG CAGATGCCAC TCAACGTGCG ACCATGGAAC TTGAGCTACC GCAACTTGCG
GCGAATGCGC ATTTCGATTG GCAACCTTCA ACAGGTAAAA CAGAAGGCAT TCAAACTCGC
AATGTCGTCT CTATTCAAGC ATGTTATACC TGTCACCAAC CAGAAAGCTT AGCGCTGCAT
GGTGGCCGTC GTATCGATAT TGAAAACTGT GCATCTTGCC ACACTGCAAC CTCTGGTGAT
CCAGAATCAG GCAATAGCAT TGAATTTACT TATATGATCC ATGCTATCCA TAAAGGTGGC
GAGCGTCATA CCTTCGATGC TACCGGTGCA CAAGTGCCTG CCCCATATAA AATTATTGGC
TATGGCGGTA AGGTAATCGA TTATGGCAAA GTGCATTACC CCCAAAAACC AGCCGCAGAT
TGTGCAGCCT GTCACGTTGA AGGCGCTGGC GCACCTGCTA ATGCCGATCT GTTCAAAGCA
GATTTAAGCA ATCAAGCATG TATTGGCTGT CACACTGAAA AACCATCTGC TCACCATAGC
AGCACTGATT GTATGGCTTG CCACAATGCA ACCAAGCCTT ACGGCGGTAC GGGAAGTGCA
GCTAAACGTC ATGGCGATGT AATGAAAGCT TATAACGATA GCCTTGGTTA TAAAGCGAAA
TTCAGCAACA TTGGTATTAA AAATAATGCC CTAACATTCG ATGTACAAAT TCTTGATAAT
AAAGATCAAC CTATCGGCAA GGAATTTATT TCGGATCCGA GTGCATACAC TAAATCGAGT
ATCTATTTCT CATGGGGAAT AGATAAAGAT TACCCTGCTT ATACCGCAGG TAGCAGATAT
AGTGATCGTG GCTTTGCATT ATCAAATTCG AAGGTTTCAA CTTACAACGA AGCAACTAAA
ACCTTCACTA TTGACAGTAC AAATAGCAAC TTAAAGCTGC CAGCTGATCT AACTGGTATG
AATGTTGAGT TGTATGCTGG TGTAGCAACC TGTTTTAACA AAGGTGGATA CGGCGTTGAA
GATGTTGTAG CGACCCCATG TTCTACCGAT ACTCGCTACG CTTACATCCA AGACCAACCA
TTCCGTTTCA AATGGAATGG AACGGATACC AATTCTGCCG CTGAAAAACG TAGAGCGATT
ATCGATACAG CTAAGTGTTC AGGTTGCCAT AACAAGGAAA TTGTTCATTA TGACAACGGC
GTTAACTGTC AAGCTTGTCA TACTCCTGAT AAGGGTTTAA AAACTGACAA CACTTACCCA
GGAACTAAAG TTCCAACGAG CTTTGCGTGG AAAGCCCACG AAAGTGAAGG CCATTATCTG
AAATATGCAG GCGTACAATC TGGCACTGTA CTAAAAACCG ATTGTGCAAC ATGTCATACT
GCTGATAAAT CCAACGTAGT AACGGGTATC GCTTTAGGCA GATCGCCAGA GCGCGCATGG
CTTTACGGCG ATATTAAGAA CAATGGTGCC GTAATTTGGG TATCTTCCGA TGCTGGCGCA
TGCTTAAGTT GCCACCAGAA GTATCTGTCT GATGCAGCCA AGTCTCATAT TGAAACTAAC
GGCGGTATCT TAAATGGTAC TAGTGCTGCA GATGTTCAAA CTCGTGCATC TGAAAGCTGT
GCAACGTGCC ATACTCCATC GCAATTGATG GAAGCACACG GTAACTAA
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| Protein sequence | MMKRFNFNTA TKAMLGAGLL SLLLTGCGGS DGKDGEDGKP GVVGVNINST STLKAKFTNA
TVDAGKVTVN FTLENANGVA VLGLTKDHDL RFGIAQLTPV KEKVGETEAD RGYQWQAYIN
AKKEPGTVPS GVDNLNPSTQ FQANVESANK CDTCLVDHGD GSYSYTYQVN VANVTEPVKV
TYSADATQRA TMELELPQLA ANAHFDWQPS TGKTEGIQTR NVVSIQACYT CHQPESLALH
GGRRIDIENC ASCHTATSGD PESGNSIEFT YMIHAIHKGG ERHTFDATGA QVPAPYKIIG
YGGKVIDYGK VHYPQKPAAD CAACHVEGAG APANADLFKA DLSNQACIGC HTEKPSAHHS
STDCMACHNA TKPYGGTGSA AKRHGDVMKA YNDSLGYKAK FSNIGIKNNA LTFDVQILDN
KDQPIGKEFI SDPSAYTKSS IYFSWGIDKD YPAYTAGSRY SDRGFALSNS KVSTYNEATK
TFTIDSTNSN LKLPADLTGM NVELYAGVAT CFNKGGYGVE DVVATPCSTD TRYAYIQDQP
FRFKWNGTDT NSAAEKRRAI IDTAKCSGCH NKEIVHYDNG VNCQACHTPD KGLKTDNTYP
GTKVPTSFAW KAHESEGHYL KYAGVQSGTV LKTDCATCHT ADKSNVVTGI ALGRSPERAW
LYGDIKNNGA VIWVSSDAGA CLSCHQKYLS DAAKSHIETN GGILNGTSAA DVQTRASESC
ATCHTPSQLM EAHGN
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