| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1712 |
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| Symbol | |
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| ID | 1169498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1800265 |
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| End bp | 1801788 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637343611 |
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| Product | transcriptional regulator, putative |
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| Protein accession | NP_717322 |
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| Protein GI | 24373279 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA TGTTAGCCCA AGCAAAAGCC CGTCAATGTA CCATCGCAAT CGATGAACTT
GTATATGATC CAGCCACTCG CCAATTGAGC AAAAATGCTC AAGAAATTGA ATTAGAACCT
CGAAGCATAG AACTGCTTGA AGTCTTTTTA CAGCAAACAG GTACCCCGAT TGCGGCAGAA
GACATTATCA GTCGGGTTTG GCAGAGCAAT TATATTTCTA AAAATGTCCT GACTAATCGA
ATTAGTACGC TACGTGCCAT TTTTAAAGAG AGCTCGCCAG AACTTGATGC GACAAAATTA
TTAGTGACTT ATCCCAAAAA GGGTTACTAC CTCAATGCGA CGCGAGTTAC TTTAATCGAC
ACCGCTGCTG ATCTGATTGC ACCATCGAAA CCTGTTCAAT CAAAGAGAAT AATCCATTTG
GTTTATATGA GTCTGCTGCT GATTGCGGGC TTTTTTATCT ACCAACAGTC GCAAAAATCA
CCCATAATTG CGCCTGTTAA TCCGCTTACC GCAACAACAC GACAGGATGC TCATATCACG
ATTGCTGTGG TTGAATTGGT GCTAAACCGA ATTCATGTCA CCAATAGTGC TGCTAGTCCT
TATGTTACAG CGATCAAAAC CGCGCTACTT TCGCAACTCG TCGCTTACCC CTATATCAAT
GTGCTCAATC AGGATGATCC AACCTATTTT TTAAGCCCGC TCAATGACAA TGAATATTGG
CCTGGCGATG GCAACACCTT ATTTTCGGAT TACAAACTTA ATTTACGACT CGACAAAGTT
CCTACATCCG ATCAGCTTAC TGCACGGGTA GAACTGGTGT ATCACAGCAG CGAAAAGCAA
ACGTATCGTG GTGAGTATAT TCTCTCTACT GGCTCACTCG ACCAAGATAT ACAAAAGATC
ACTGATGATT TGATTGATTA TTTTAAGTTG CCAGTAATAG CCTCTGCCAA TACAGAGCAA
ACTCATGCCT TTATCAATCA AACTTTAGCG CAACAGCTAG ATGCTGATAA CCCCAGTATG
TTTCAGGCCA ATTATCTTGC CAGACGACTG TTGCTTGCCC CAGAGCTCAA GTCTGATCAA
ATACAAACTT GGCTCAATCG TATCGACAAG TTGTTTCCTT TCCCGAGTGA AGAAACTGAA
ATTTGGCTTG GTCTGCTTGA TTTTAGAATT GGAAATCATA AACGCGCACG TGAACGCTTG
TTGAAGGGGC ACTTCAATAA TCAAATCGAC AACGCATTTA TTTATTTAGT GTTGTCAAAT
ATTGCCCTTA AAGATGATAA ACCTGAACTT TTCCGTTATT ACTACCTTAA ATCATTGGTC
TCTTTGTCTT TAGTCGTACC GTCGAAAACG ATTTTTGAGC AGTTGTCCCG CGAGAAACTC
ACGAGTCAAT GTTTAGGTGC ATGGGGCGAG TTATTCCAAG ACAAAGCGCT TACCACTGAC
ATCCATTCTT GGGCAATGTT TGCTAATTAT TGTGAAACAG CCGCCCCATA TCTTCCTAAA
GCCTCAGCAA AAAGGTCGCA ATGA
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| Protein sequence | MADMLAQAKA RQCTIAIDEL VYDPATRQLS KNAQEIELEP RSIELLEVFL QQTGTPIAAE
DIISRVWQSN YISKNVLTNR ISTLRAIFKE SSPELDATKL LVTYPKKGYY LNATRVTLID
TAADLIAPSK PVQSKRIIHL VYMSLLLIAG FFIYQQSQKS PIIAPVNPLT ATTRQDAHIT
IAVVELVLNR IHVTNSAASP YVTAIKTALL SQLVAYPYIN VLNQDDPTYF LSPLNDNEYW
PGDGNTLFSD YKLNLRLDKV PTSDQLTARV ELVYHSSEKQ TYRGEYILST GSLDQDIQKI
TDDLIDYFKL PVIASANTEQ THAFINQTLA QQLDADNPSM FQANYLARRL LLAPELKSDQ
IQTWLNRIDK LFPFPSEETE IWLGLLDFRI GNHKRARERL LKGHFNNQID NAFIYLVLSN
IALKDDKPEL FRYYYLKSLV SLSLVVPSKT IFEQLSREKL TSQCLGAWGE LFQDKALTTD
IHSWAMFANY CETAAPYLPK ASAKRSQ
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