| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1646 |
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| Symbol | |
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| ID | 1169440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1731310 |
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| End bp | 1732200 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343554 |
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| Product | GGDEF family protein |
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| Protein accession | NP_717257 |
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| Protein GI | 24373214 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTG GCTTAGCGAC CACGTTATAT CCCGATGAAT ATAACTATCA AACCGACGCA
TACAGCCCGA CATCCTCGCC AGTGGATCTC GTGCAAGTGA TCCAGCAACT CCATGCCAGT
TTAGATCCGC GGACAGTCTT TGCCTGCTAC GGCAAAGTGC TGGGACAACA TCTGCCTATT
CAAGGTGTTC GTCTGCAATC AGAGCAACAT AAATTAAGCT GGGGCAAACG TTATGGCATT
AGCCTTAAAC GGCAGATCAT TTGTGGCGGT ACGCCGCTCA CATTGCAGTA TCAACTGTTA
ACGCCGCTGA CGCCATCACA GAGTATCTGC TTGCAAGAAA TCGAGCCGCT ATTGTTACAG
CCATTACTGA ATGCCATGCA GTACCAAGAA ATGTCCATGC AAGCGATGTT TGATGCGTTA
ACAGGGCTAG GCAATCGCCA CTATTACTCA CAAAGTCTTA AAAATGCGGT GGCTAGGGCA
CAAAGAAAAC AGGGCAGCGT GTCGCTTATC GTGTTGGATT TAGATAATTT TAAAAAGCTA
AATGATAAAT ATGGTCACAA ATGTGGGGAT TATATTCTGA AGGAGTTTGG TGACATTATC
CGCAGCAGCA TCCGCAGTAC CGATCAGGCT TTTCGGATTG GTGGGGATGA ATTTGTGGTG
ATAGTCCAAG GGAATATTCA TGCAGCAGGA TTACTGTGCG AACGTATCGT ATCCGCCACT
AACACCCATG CCAGTTTTCA TCAGTTTGGT GTGAGCTGCA GCTTAGGTGC TGCAGAAGCG
AGTGAAACAA TGGAAGCCGA GCAACTTTAT GAACAGGCGG ATAAAACCTT GTATCAAGCC
AAAGCGTCTG GCCGCAATTG CTACAAGCTA AGCCCAACTC AACTGTCTTA A
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| Protein sequence | MDFGLATTLY PDEYNYQTDA YSPTSSPVDL VQVIQQLHAS LDPRTVFACY GKVLGQHLPI
QGVRLQSEQH KLSWGKRYGI SLKRQIICGG TPLTLQYQLL TPLTPSQSIC LQEIEPLLLQ
PLLNAMQYQE MSMQAMFDAL TGLGNRHYYS QSLKNAVARA QRKQGSVSLI VLDLDNFKKL
NDKYGHKCGD YILKEFGDII RSSIRSTDQA FRIGGDEFVV IVQGNIHAAG LLCERIVSAT
NTHASFHQFG VSCSLGAAEA SETMEAEQLY EQADKTLYQA KASGRNCYKL SPTQLS
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