| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1552.2 |
|---|
| Symbol | |
|---|
| ID | 1169360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1630518 |
|---|
| End bp | 1630835 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343477 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_783477 |
|---|
| Protein GI | 28275221 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGTC CCCAATTTCG CCAAGACCCA GTAAGCGTGC AGTTGAGCGT ACCCGAAAAC
TGGCAGAGTT ATTCGGGCAT GTCATCGGGC CCAGTGGCAC ATTTCTTTAT CGCACCAAAT
TATGATGTGT TGATTGATTC TCCCATTGAA ACAGGTACTA GCACCCATAA AAAGTTTACG
GCCAATGGCA AAGACTATGA GCTGCTGTTT TGGGGCGAAG GTAACTACGA TGCGGATAAA
GTGGTTAAAG ACTTAACTGC ATTGAGTGGG CAAGCCAAGG CGATTTGGGA TGAATATCCC
TTTGAGCGCT ATGTGTAA
|
|---|
| Protein sequence | MYSPQFRQDP VSVQLSVPEN WQSYSGMSSG PVAHFFIAPN YDVLIDSPIE TGTSTHKKFT
ANGKDYELLF WGEGNYDADK VVKDLTALSG QAKAIWDEYP FERYV
|
|---|
| |