Gene SO_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1549 
Symbolxni 
ID1169355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1623885 
End bp1624595 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID637343472 
Productexonuclease IX 
Protein accessionNP_717163 
Protein GI24373120 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTT TAACGGAGCG TGTGAGTGTC GCTTGCACTA AACTGCTGCG CATTCACCAC 
CCAACCCATG TCGCTGTCGT CTGGGATGGG GATGAGATCT CATGGCGCAA ACAACTTTAC 
CCCGATTATA AAAAGGGCCG TAAACCTATG CCAGAGCCCT TAGCTGCTGG GCTGATAGCA 
TTACAGGAAC ACCTTCAGAA CTTACAAATC CAATCTATTT ATGCCGCCGC AGAAGCCGAT 
GACGTTATTG CCACCCTAGC GACAAAAACC GCCAAGGCCC AGGGCGAAGC CCTTATCGTC 
TCCACTGACA AAGGCTTTAG CCAACTCAAT CATCCCCGTA TCAGCCAATG GGATCATTTC 
AATCAGCAAT ACCTGAATAT CGCCGAACTC GAGCAAAAAC TGGGTGTGGA TCGCAGCCAA 
TTTCTCGATT TAATGGCTCT TGCGGGAGAT AGTGGCAATA AAATCCCCGG CATTCCAGGT 
ATTGGCCCCA AATCGGCCGC CGAATTACTG AGAACCTTCA GAACCTTAGC AACCCTGTTT 
TCTTCTTTGC CCAATCTTGG GGCGAAACAA GCGAAAAAAC TGGCCGAAGG CCGAGATATG 
GCGCGCCTAA GTTATAAATT AGTGCAGTTG CAGACCGATT TACCCTTAAA TATCAACTTA 
CGGGATTTTA GGGTAAATAG CCCAACCAAA GCATCATCGA ACAATCTGTG A
 
Protein sequence
MESLTERVSV ACTKLLRIHH PTHVAVVWDG DEISWRKQLY PDYKKGRKPM PEPLAAGLIA 
LQEHLQNLQI QSIYAAAEAD DVIATLATKT AKAQGEALIV STDKGFSQLN HPRISQWDHF 
NQQYLNIAEL EQKLGVDRSQ FLDLMALAGD SGNKIPGIPG IGPKSAAELL RTFRTLATLF 
SSLPNLGAKQ AKKLAEGRDM ARLSYKLVQL QTDLPLNINL RDFRVNSPTK ASSNNL