Gene SO_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1534 
Symbol 
ID1169342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1609321 
End bp1609968 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID637343461 
Producthypothetical protein 
Protein accessionNP_717150 
Protein GI24373107 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTAACG AGGATGTTGC GTCAAGTGCT TATGTGTTAG AAGGGAAGCC CTCAGAGACT 
TTGATTTTAT TTGCCCATGG CGCAGGTGCG AATCGAGACT CAGCGTTTAT GCAGCAGATG 
ACTTTAGGTC TGGCGGCTAA AGGCTATCAA GTAATGCGCT TTAACTTTCC TTATATGCAG 
GCCAATGCAC TGGATGGTAA AAAGCGTCCT CCCGACAGAG CGCCTAAACT GCTCGCTTGT 
TTTAGCGACA TGCTGGAATT AGCACATAAA CAGCCAGAGG TTAAACGCGT GGTCCTGATG 
GGCAAATCCA TGGGTGGACG TATGGCGGCG TTACTGGCCT GCGACAGCAC GCAAGTCAGT 
CGTATCGATA GGGTTATTTG CTTGGGTTAT CCCTTTATTC CGCTTAAGGG CGGTGAGCCT 
AGGTTAGCAC CCCTGAACGA CAGCCAAGTG CCCGTGTTAG TGCTGCAAGG GGAGCGGGAT 
AAGTTTGGCG GCAAAATGCA AATACCTAGC TGGTCGCTTA AGTGTGACGT CCAAATTGAT 
TACTTAGCCG ATGGGGATCA TAGTTTTGTC CCAAGAAAGT CGTCAGGCAC CACCGAAGCG 
GCTAACTTTA CACTGGCTGT TGATTTATCA GCAAAATTTA TTGGCTAA
 
Protein sequence
MVNEDVASSA YVLEGKPSET LILFAHGAGA NRDSAFMQQM TLGLAAKGYQ VMRFNFPYMQ 
ANALDGKKRP PDRAPKLLAC FSDMLELAHK QPEVKRVVLM GKSMGGRMAA LLACDSTQVS 
RIDRVICLGY PFIPLKGGEP RLAPLNDSQV PVLVLQGERD KFGGKMQIPS WSLKCDVQID 
YLADGDHSFV PRKSSGTTEA ANFTLAVDLS AKFIG