| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1420 |
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| Symbol | |
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| ID | 1169239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1478439 |
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| End bp | 1479476 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637343362 |
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| Product | outer membrane porin, putative |
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| Protein accession | NP_717040 |
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| Protein GI | 24372998 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT CATTTGCTAT TTCGCTGCTC ACCTTGGCGC TGTGTGCTAC ACAGGCCGTG
GCGGATGAAC ATAAATTTTA TGGTCGTATC GATTATTCGG TAACTCATTC CGATAGTGGC
AGTGCGACGC ATAAAAATAA AAGCGGTACC ATATTAGAGA ATAACTTTTC GCGGTTTGGT
ATTAAAGGCT CGAGCCAATT AACTGATAGC ACCTCATTAT TTTACCAGAT TGAAGTTGGC
GTAAATGGTG AGAGTCAAGA TAGTGGCGAT AAACCATTCT CAGCACGCCC AACATTTATT
GGTGTTAAGC ACAGCACTTA TGGCGCCTTA GCCGTTGGAC GGATTGATCC GGTATTTAAA
ATGGCTAAGG GGATGTCTGA TGCAATGGAC AATTACTCCT TAAAACATGA CCGTTTATTT
GCCGGAGACA AGCGCTGGGG TGATTCCTTT GAATACAAAT CCGCCCATTG GAATAAATTG
CAATTAGGTG TGAGCTATTT ATTGGAGGAC AATCATTATA GTAATAATGA TAACCGCCGT
GATAATGGCA ATTACCAATT AGCGGTTACC TATGGTGATA AGTTCTTTAA AACCAGTGAT
GTATATGCCG CGGTTGCCTA CAGTGATGGT GTTGAAGACA TTGAAGCTTA CCGTGGTGTC
ATCCAATATA AGTGGGATAA GTGGCAGTTT GCGACTATGT TGCAACATTC ACAATTGGTG
AATACGGATA AAACCGATTG GCAACAACGC GAAGGTGATG GTGTTATCGT TAGTGCCAAA
TATCAATTAG GTCAATTATC GTTAAATGCC CAATATGGAT TTGATAATTC CGGTACCGGA
TTAATCGCTA ACCGTATTTA TGCCAGTAAA AATACCTTGA TTGATGAGGT TCCAGAAATC
TCCCAATGGG CGATTGGTGC TGAATATAAA TTGAGTAAAT CAACACGCCT ACATACTGAA
ATCGGTCAGT TTGATGTGAA GCAGTATGAT GATTTTGACG ATACTATTGT CAGCCTTGGT
ATGCGTTACG ACTTCTAA
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| Protein sequence | MNKSFAISLL TLALCATQAV ADEHKFYGRI DYSVTHSDSG SATHKNKSGT ILENNFSRFG
IKGSSQLTDS TSLFYQIEVG VNGESQDSGD KPFSARPTFI GVKHSTYGAL AVGRIDPVFK
MAKGMSDAMD NYSLKHDRLF AGDKRWGDSF EYKSAHWNKL QLGVSYLLED NHYSNNDNRR
DNGNYQLAVT YGDKFFKTSD VYAAVAYSDG VEDIEAYRGV IQYKWDKWQF ATMLQHSQLV
NTDKTDWQQR EGDGVIVSAK YQLGQLSLNA QYGFDNSGTG LIANRIYASK NTLIDEVPEI
SQWAIGAEYK LSKSTRLHTE IGQFDVKQYD DFDDTIVSLG MRYDF
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