| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1277 |
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| Symbol | |
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| ID | 1169097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1326973 |
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| End bp | 1328523 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343222 |
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| Product | proton-dependent oligopeptide transporter (POT) family protein |
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| Protein accession | NP_716900 |
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| Protein GI | 24372858 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTTG GTACCAATCA GGTAAGCAAG ACACATTCGT TTATGACTGT GTCACTTATC
GAATTATGGG AACGTTTTGG TTATTACGGC ATGCAGGCGC TGATCGTGTA CTTTATGGTG
CAGCGTCTTG GCTTTGATGA CTCACGTGCA AACTTAGTGT GGAGCGCCTG TGCGGCGTTA
ATTTACGTAT CACCCGCAAT TGGGGGCTGG GTCGGGGATA AAATTCTTGG CACCAAACGC
ACTATGTTGC TCGGTGCGGG GATTTTATCC GTCGGTTATG CACTCATGAC GGTGCCAACC
GAAAACACTT GGTTTATGTT CTCCGCCCTT GGGGTGATTG TGGTCGGTAA CGGCCTGTTC
AAACCCAATG CCGGTAACTT AGTCCGCAAG ATCTACGAAG GCGATGACTC TAAAATCGAC
AGTGCTTTTA CCATCTATTA TATGGCGGTA AACGTAGGTT CGACCTTCTC TATGCTGTTA
ACCCCTTGGA TAAAGGACTA TGTTAACGCT CAATACGGTA ATGAATTTGG CTGGCATGCC
GCCTTTGCCG TGTGCTGTGT GGGTATTCTT GTCGGTTTAG GCAACTATGC TCTGATGCAT
AAAAGCCTCG CGAACTATGG TTCTGAGCCA GATACGCGCC CAGTCAACAA GAAGAGCCTT
GCTATTGTAT TAGCATTAGC AGCACTTTCC GTGGTTGCTT CGGCGATTAT TCTAGAATAT
GAAGATGTTG CCCGTGTATT CGTTTACGCT GCTGGTGTTG CAGTATTAGG CATTTTCTTC
CATTTGATTC GCACAAGTGA GCCAAGTGAG CGTGCCGGAC TTATCGCGGC GCTTATTCTC
ACCGTACAAA CGGTATTCTT CTTTATCTTC TATCAGCAAA TGTCGACTTC GCTGGCTCTG
TTTGCGCTAC GTAACGTCGA TTGGGATTTC CAAGTCTTTG GCACCCATTT ATGGACTTGG
TCACCTGCGC AGTTCCAAGC ACTTAACCCA ATCTGGATCA TGGTATTAAG CCCAGTTCTG
GCATGGAGTT ATTCCTGGGC TGGCCGCAAT AATAAGGACT TTTCGATAGC AGCTAAGTTT
GCCTTGGGCT TTGCTGTCGT GGCGATTGGT TTCTTTATCT ACGGTTTTGC AGGCCAATTT
GCCGTAAATG GTAAAACCTC TTCTTGGGTA ATGATTTGGG GTTACGCTTC TTACTCTTTG
GGGGAGTTAC TAGTAAGTGG CCTTGGTTTA GCGATGATTG CCCGCTACGT GCCTGCACGT
ATGGGCGGCT TTATGATGGG CGCGTATTTC GTGGCATCGG GCATTTCCCA GTACTTAGGC
GGCGTTGTGG CCAACTTTGC TAGCGTGCCA CAGGACTTAG TCGATCCACT GCAAACACTC
CCTGTTTATA CCAATCTATT CAATAAATTA GGGGTTGCGG CCGTGGTTTG TACCATTATC
GCTCTCGCCG TATTACCGCT GATGCGCCGT TTGACAGAAA GCCATCATGC CCATAGCAGT
ATTGAGAATA ATGCAGCAGC CTCCTTGCGC GATGTAAAAG CTGAGCAATA A
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| Protein sequence | MTLGTNQVSK THSFMTVSLI ELWERFGYYG MQALIVYFMV QRLGFDDSRA NLVWSACAAL
IYVSPAIGGW VGDKILGTKR TMLLGAGILS VGYALMTVPT ENTWFMFSAL GVIVVGNGLF
KPNAGNLVRK IYEGDDSKID SAFTIYYMAV NVGSTFSMLL TPWIKDYVNA QYGNEFGWHA
AFAVCCVGIL VGLGNYALMH KSLANYGSEP DTRPVNKKSL AIVLALAALS VVASAIILEY
EDVARVFVYA AGVAVLGIFF HLIRTSEPSE RAGLIAALIL TVQTVFFFIF YQQMSTSLAL
FALRNVDWDF QVFGTHLWTW SPAQFQALNP IWIMVLSPVL AWSYSWAGRN NKDFSIAAKF
ALGFAVVAIG FFIYGFAGQF AVNGKTSSWV MIWGYASYSL GELLVSGLGL AMIARYVPAR
MGGFMMGAYF VASGISQYLG GVVANFASVP QDLVDPLQTL PVYTNLFNKL GVAAVVCTII
ALAVLPLMRR LTESHHAHSS IENNAAASLR DVKAEQ
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