Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1254 |
Symbol | |
ID | 1169076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1303494 |
End bp | 1304246 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343201 |
Product | hypothetical protein |
Protein accession | NP_716877 |
Protein GI | 24372835 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTGC AAGAAGTTGT AAGCCGCTCA GATGCAAGCC TTAAGCAAGT GGCGGATGTG ATTGGCCAAG ATGCAGCAAT CTCGGCGCGT ATTATTAAAG TTGCCAACAG CGCCTTATAT AGCCGTGGTA TTCCTGCTGA AAGCATTAAT AATGCTGTGG CTCGCATCGG TTTGATTCAA ATTAAGAGTA TTGCAACCTC AGTTGCCATG GAGCAGCTGT TTATCTCCAC CAATGAGATG GTGTGGGAAG TAATGGATGA GGTTTGGCGT ACTTCTATCG ACGTAACGGC GGCGGCTTGT GCCATGTTGC AGATGTATAA TAAGCGTCGT CCTAGTCAGT TAAATTTAGA CACTTTAACC CTTGCAGGTT TAGTCCATAA TATTGGTGCA TTGCCAGTGC TGACCGAGGC GGAAGCCCAT CCCGAGTTAT TTACCAGTAT TGAGCAATTG CGTTCTTTAG TTCGTAAAAT GCAAGGTCCT TTAGGTCGTG CCGTATTAAA GAGTTGGGAT TTTGCACCAG AGGTGATGGA AGTGGTTGAG CGTTGGGCTG ATTTACCCTA TTTACCCGAC CATGTCACCT ACTTAGATTT TATCCGTGCC GCCGCATTCT ACACCGGTGA GTTACGCGCA GGGGCTGATT TTGAGCAGCG GATGGATGTG TTTGTCGGCC GAGGGCTGCC TGTCTCGGCG AATGATTTAG CAAGCGATGA ATTTATGGAT AAATTCCATT CAATCAAAGA GAGTTACCAA TAG
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Protein sequence | MRVQEVVSRS DASLKQVADV IGQDAAISAR IIKVANSALY SRGIPAESIN NAVARIGLIQ IKSIATSVAM EQLFISTNEM VWEVMDEVWR TSIDVTAAAC AMLQMYNKRR PSQLNLDTLT LAGLVHNIGA LPVLTEAEAH PELFTSIEQL RSLVRKMQGP LGRAVLKSWD FAPEVMEVVE RWADLPYLPD HVTYLDFIRA AAFYTGELRA GADFEQRMDV FVGRGLPVSA NDLASDEFMD KFHSIKESYQ
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