Gene SO_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1254 
Symbol 
ID1169076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1303494 
End bp1304246 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID637343201 
Producthypothetical protein 
Protein accessionNP_716877 
Protein GI24372835 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGC AAGAAGTTGT AAGCCGCTCA GATGCAAGCC TTAAGCAAGT GGCGGATGTG 
ATTGGCCAAG ATGCAGCAAT CTCGGCGCGT ATTATTAAAG TTGCCAACAG CGCCTTATAT
AGCCGTGGTA TTCCTGCTGA AAGCATTAAT AATGCTGTGG CTCGCATCGG TTTGATTCAA
ATTAAGAGTA TTGCAACCTC AGTTGCCATG GAGCAGCTGT TTATCTCCAC CAATGAGATG
GTGTGGGAAG TAATGGATGA GGTTTGGCGT ACTTCTATCG ACGTAACGGC GGCGGCTTGT
GCCATGTTGC AGATGTATAA TAAGCGTCGT CCTAGTCAGT TAAATTTAGA CACTTTAACC
CTTGCAGGTT TAGTCCATAA TATTGGTGCA TTGCCAGTGC TGACCGAGGC GGAAGCCCAT
CCCGAGTTAT TTACCAGTAT TGAGCAATTG CGTTCTTTAG TTCGTAAAAT GCAAGGTCCT
TTAGGTCGTG CCGTATTAAA GAGTTGGGAT TTTGCACCAG AGGTGATGGA AGTGGTTGAG
CGTTGGGCTG ATTTACCCTA TTTACCCGAC CATGTCACCT ACTTAGATTT TATCCGTGCC
GCCGCATTCT ACACCGGTGA GTTACGCGCA GGGGCTGATT TTGAGCAGCG GATGGATGTG
TTTGTCGGCC GAGGGCTGCC TGTCTCGGCG AATGATTTAG CAAGCGATGA ATTTATGGAT
AAATTCCATT CAATCAAAGA GAGTTACCAA TAG
 
Protein sequence
MRVQEVVSRS DASLKQVADV IGQDAAISAR IIKVANSALY SRGIPAESIN NAVARIGLIQ 
IKSIATSVAM EQLFISTNEM VWEVMDEVWR TSIDVTAAAC AMLQMYNKRR PSQLNLDTLT
LAGLVHNIGA LPVLTEAEAH PELFTSIEQL RSLVRKMQGP LGRAVLKSWD FAPEVMEVVE
RWADLPYLPD HVTYLDFIRA AAFYTGELRA GADFEQRMDV FVGRGLPVSA NDLASDEFMD
KFHSIKESYQ