Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1190 |
Symbol | |
ID | 1169018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1233332 |
End bp | 1234150 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343143 |
Product | hypothetical protein |
Protein accession | NP_716815 |
Protein GI | 24372773 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC GTTTTGTTGC CTTAGTTAGC GCACTGTGCA TCAGCCCATT TGCCAGCAGC CATGATCGCT GGATCTTACC TAGCCACTAC AATGTGTCGG CAGAAAGTAA TGAGGCCGTT TGGATCACCT CTGATGTTTC AGCGAGTAAT CAAGTGTTTA TGGTTGATAA GCCTGTAACG GCTAGTGATG TGAAAGTGTA TTTACCCGAT GGCAAGCCGA GTTCACCGAG CTCGAGCTAC ACTGGCGGCC GTAAATCGGT TTTCGATGTG CAGCTATTAC AAGACGGCAC CTATAAGTTC GAGAAGGAAG TTACGCCTCG GTATTTTTCG GTTTACAAAG TCAAAGGAAA GGAAGAGGTA GTGCGTAGTC GTCTTGATAA AAAAGCGACC GCGGCTGTGA TGCCTAAGGA TGCCTATGAC CTTAAAGGCT CATTGACAGT TGCTAGGGTT GAAACCTATG TGACCCGTAA TAAACCAACC GATAAGGTAC TGGCACCTAA AGGTGAATAC TTAGAGTTAG TACCTATCAC GCATCCTGCT GATATTGTTG AGAATGAACC TGCAACGCTG CAATTTGTCT ACGATGGAAA ACCCGTTGAA GGCGTAAGCG TAGCCATCAT GAAGGATGGT AGCCTATACC GTAACAAACC AGAAGAAATC AGCTTAACCT CTGATAAAGA AGGTAAAGTA GCCATGACGT TGCCAGCTGC TGGTCGTTAT CTATTGCATG CCTCTATCGA GCGCCCAAGC CCAGATAAAT CACTTGCAGA TAAGACGGTA AGCGAAATCT TTTTGACCTT CGAGGCAGGG CTGGAATAA
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Protein sequence | MKLRFVALVS ALCISPFASS HDRWILPSHY NVSAESNEAV WITSDVSASN QVFMVDKPVT ASDVKVYLPD GKPSSPSSSY TGGRKSVFDV QLLQDGTYKF EKEVTPRYFS VYKVKGKEEV VRSRLDKKAT AAVMPKDAYD LKGSLTVARV ETYVTRNKPT DKVLAPKGEY LELVPITHPA DIVENEPATL QFVYDGKPVE GVSVAIMKDG SLYRNKPEEI SLTSDKEGKV AMTLPAAGRY LLHASIERPS PDKSLADKTV SEIFLTFEAG LE
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