Gene SO_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1190 
Symbol 
ID1169018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1233332 
End bp1234150 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content46% 
IMG OID637343143 
Producthypothetical protein 
Protein accessionNP_716815 
Protein GI24372773 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC GTTTTGTTGC CTTAGTTAGC GCACTGTGCA TCAGCCCATT TGCCAGCAGC 
CATGATCGCT GGATCTTACC TAGCCACTAC AATGTGTCGG CAGAAAGTAA TGAGGCCGTT
TGGATCACCT CTGATGTTTC AGCGAGTAAT CAAGTGTTTA TGGTTGATAA GCCTGTAACG
GCTAGTGATG TGAAAGTGTA TTTACCCGAT GGCAAGCCGA GTTCACCGAG CTCGAGCTAC
ACTGGCGGCC GTAAATCGGT TTTCGATGTG CAGCTATTAC AAGACGGCAC CTATAAGTTC
GAGAAGGAAG TTACGCCTCG GTATTTTTCG GTTTACAAAG TCAAAGGAAA GGAAGAGGTA
GTGCGTAGTC GTCTTGATAA AAAAGCGACC GCGGCTGTGA TGCCTAAGGA TGCCTATGAC
CTTAAAGGCT CATTGACAGT TGCTAGGGTT GAAACCTATG TGACCCGTAA TAAACCAACC
GATAAGGTAC TGGCACCTAA AGGTGAATAC TTAGAGTTAG TACCTATCAC GCATCCTGCT
GATATTGTTG AGAATGAACC TGCAACGCTG CAATTTGTCT ACGATGGAAA ACCCGTTGAA
GGCGTAAGCG TAGCCATCAT GAAGGATGGT AGCCTATACC GTAACAAACC AGAAGAAATC
AGCTTAACCT CTGATAAAGA AGGTAAAGTA GCCATGACGT TGCCAGCTGC TGGTCGTTAT
CTATTGCATG CCTCTATCGA GCGCCCAAGC CCAGATAAAT CACTTGCAGA TAAGACGGTA
AGCGAAATCT TTTTGACCTT CGAGGCAGGG CTGGAATAA
 
Protein sequence
MKLRFVALVS ALCISPFASS HDRWILPSHY NVSAESNEAV WITSDVSASN QVFMVDKPVT 
ASDVKVYLPD GKPSSPSSSY TGGRKSVFDV QLLQDGTYKF EKEVTPRYFS VYKVKGKEEV
VRSRLDKKAT AAVMPKDAYD LKGSLTVARV ETYVTRNKPT DKVLAPKGEY LELVPITHPA
DIVENEPATL QFVYDGKPVE GVSVAIMKDG SLYRNKPEEI SLTSDKEGKV AMTLPAAGRY
LLHASIERPS PDKSLADKTV SEIFLTFEAG LE