| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1136 |
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| Symbol | |
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| ID | 1168967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1177348 |
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| End bp | 1178691 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637343084 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_716761 |
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| Protein GI | 24372719 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTC CTAAGCTTTC TCCTTCCCCA GAGTCTTACC CTGAGTCGTT AACCTTTGCC
GAGCTTGGGT TAAATGCCGC ATTACGTAAG GCCTTGCCTA CAAGGCTTAA ACATCCGACA
CGGGTACAGC AATTGGCGAT TCCGGCGATT CTTGCTGGGC GGGATTTACT GGCGCTGTCG
CAAACAGGGA GTGGTAAAAC CTTTGCCTTT GGTTTGCCCT TGCTGCAAAT CCTCTGGCAA
CAAATTGCTG TGCAAACGAC GGCTAAATCT GTGCCAGCTG CTAAGCCACT GGCATTAGTG
TTGGTGCCGA CGCGGGAGTT AGCACTGCAG GTGAGTGAGG CGCTGCACGC GCTGGCGAGT
CAGTTATCTA CATCGGCTCC TTTGAACATT CAGCTCCTGT GTGGCGGTGT TGCGCTGGAG
CAGCAATTAG CCGACCTCTC CGCTAAACCG CAGCTTGTGG TGGCAACCCC TGGGCGCTTA
TTGGACTTAT GTACACAATC CCATATCAGC CTTGATGCGA TTAAACATTT AGTGCTGGAT
GAGGCTGACC GTTTGCTGGA GATGGGTTTT TGGCCCGATA TGCAAAAGCT GATGGCAATG
ATGCCAAAGC GTAAGCAAAC CTTATTGTTT TCAGCCACCT TGCCTGAGGC TTTGGATTCC
TTGGCGGGTA AATTGCTGAC TAATGATCCG TTAAAGGTTG AGGCCAGTAC GCGCAATGCT
GTGGTTGGTG AAATCGAAGA GCAACTGTAT TTAGTCAATA AGGGTAGTAA GGCGCAGGCA
TTGATTGCGT TACTCAAACA ATATCAATGG CCGCAGGTGC TGGTGTTTAT CAGCGCCCGC
GATGATGCCG ATGCGATTGC GAAACGGCTA GTGAAGGCGG GGATTAACGC TGCTGCGCTG
CACGGCGAAA AAGATCAAAC CGTGCGTAGC CAAACCTTGG CCGACTTTAA AGCCGATCGC
ATTCAAGTAT TAGTGGCGAC AGATTTGATG GCCCGCGGCA TTCATGTCGA TGCCTTACCT
GTGGTGATCA ACTTAGATTT ACCCACCAGT GCGCCTGTGT ATGTGCACCG CATTGGTCGC
ACCGCGAGGG CGGGCGCCAA AGGGCTAGCC ATATCTTTAG TGTGCCATGG TGAAATGCCA
AACTTAACCG CGATCCGCAA TTTGACTGCG CGGGCGTTAC CGCTGGTATT TTTGGCGGAC
TTTCCGGTGA CCGATAAACC AAGTGAAAAA ATCATTGATG GCGCTGAAAA TAAGGTTATC
CCTAAGCGCC CACCGCGGGA TAAACAGGCA AATCGTCGCA GCATCAATAA GCACAGCGTC
AAAGCGTTTA AAGGTAAGCG TTGA
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| Protein sequence | MTIPKLSPSP ESYPESLTFA ELGLNAALRK ALPTRLKHPT RVQQLAIPAI LAGRDLLALS
QTGSGKTFAF GLPLLQILWQ QIAVQTTAKS VPAAKPLALV LVPTRELALQ VSEALHALAS
QLSTSAPLNI QLLCGGVALE QQLADLSAKP QLVVATPGRL LDLCTQSHIS LDAIKHLVLD
EADRLLEMGF WPDMQKLMAM MPKRKQTLLF SATLPEALDS LAGKLLTNDP LKVEASTRNA
VVGEIEEQLY LVNKGSKAQA LIALLKQYQW PQVLVFISAR DDADAIAKRL VKAGINAAAL
HGEKDQTVRS QTLADFKADR IQVLVATDLM ARGIHVDALP VVINLDLPTS APVYVHRIGR
TARAGAKGLA ISLVCHGEMP NLTAIRNLTA RALPLVFLAD FPVTDKPSEK IIDGAENKVI
PKRPPRDKQA NRRSINKHSV KAFKGKR
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