Gene SO_1098 details

Gene Information

• Locus tag: SO_1098
• ID: 1168931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1140635
• End bp: 1141183
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637343049
• Product: alkylated DNA repair protein
• Protein accession: NP_716724
• Protein GI: 24372682
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3145] Alkylated DNA repair protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGGGGT ATCTGGGCAA GGCGCAACAA AATGCGTTGA TTAACGAGGC GCAATCTTAC 
CCACTTACTC GCCCGCAAAT TCAAGTGTTT GGTCGATATC ATGCTATCCC TCGGCAGCAG 
GTATGGTATG GCGACCTAGG ATGTGACTAT TTATATTCAG GGTTATTTAT TCGTGCCTTA 
CCTTGGCCTA AGTATTTGCA AAAATTACGC GATAAATTAC AACGGGATTT TGAACTGGGC 
AGCAATGGCG TGTTAGTTAA CCGTTACGCT GATGGTCAAG ATTGTATGGG CGCTCACAGC 
GATGATGAGC CTGAAATTGC TCACGGCAGT GATATTGCCT CAATCAGCTT AGGTGCGACT 
CGTGATTTTG TGATTAAACA TAAACATAGC AAGCAGAAAT GCTGCATTAG TTTACATAGT 
GGTGACTTGT TAATTATGCA CTGGCCTATG CAACGAGACT GGTTGCACAG TGTGCCGAAG 
CGCCTAAAGG TCACAGAGCC TCGTTGGAAC TACACATTTA GGCAACTTGT CGTTAATTAT 
CATGGGTAA 

 

Protein sequence

MRGYLGKAQQ NALINEAQSY PLTRPQIQVF GRYHAIPRQQ VWYGDLGCDY LYSGLFIRAL 
PWPKYLQKLR DKLQRDFELG SNGVLVNRYA DGQDCMGAHS DDEPEIAHGS DIASISLGAT 
RDFVIKHKHS KQKCCISLHS GDLLIMHWPM QRDWLHSVPK RLKVTEPRWN YTFRQLVVNY 
HG