| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1092 |
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| Symbol | |
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| ID | 1168925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1130671 |
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| End bp | 1131450 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343043 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | NP_716718 |
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| Protein GI | 24372676 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACCTG TTTATCATCC TCTTAGCTCA GATCAACTGC CAGTAGCTGA TATTTTCTTT
AACTATGAAG CCTTTCTGCC TAATACCATT ACGCCAAAAC ATCGCCATAA TTGGGGGCAA
TTACAGCTGA TCAGTGGTGG TATTATGGAG TTGCATGCCT CGGGACAACG ATTTTTGTCG
CCATCCCAAT ATGCGATTTG GGTGCCAGCG GGCGTAGAGC ATGAGAGTTA CACCCGCCGC
AGCATCCATT ATTGCTCATT AAATATTGTC GCCAATCGTG CGCAGGTATT TCCTGACGTG
ACCTGCTTAC TTGCGGTGAC GCCAATAGCG CAGGCAATTG TGAATGATCT CCGCCAGCGA
CAGGTTCGGG TTGCACAGAC TGATGCGGAT AAACGTTTGG TTGAAGTGTT AATCGATCAG
CTGATTTTAG GCCAAGCACA GCCCCAATTT TTACCATCAA GCACCGATAA ACTGTTACAA
CCTATTTTGC AGCAACTTGA ACTTGAGCCT GCCAGTCAAA AGAGCCTTAA AAGCTGGGCG
AGTGAATTAC ATACCACAGA GCGCACGCTC GCTCGGCGTT GCCAAAACTG CCTTGGGATG
AGTTTTACTG AATTGCGTCA GCGGCATAAG TTTATTTATT CGTTGCAATT ACTGCGTGAA
GGCTTATCGA TAAAAGAGGT GGCGTTGACG CTGGGTTACA ATCAAACATC ACCTTATATA
GTGATGTTTA AAAAGTATGC CCAATACTCA CCCGAGCAGT ATCGGCGACA ATTGGCATAA
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| Protein sequence | MRPVYHPLSS DQLPVADIFF NYEAFLPNTI TPKHRHNWGQ LQLISGGIME LHASGQRFLS
PSQYAIWVPA GVEHESYTRR SIHYCSLNIV ANRAQVFPDV TCLLAVTPIA QAIVNDLRQR
QVRVAQTDAD KRLVEVLIDQ LILGQAQPQF LPSSTDKLLQ PILQQLELEP ASQKSLKSWA
SELHTTERTL ARRCQNCLGM SFTELRQRHK FIYSLQLLRE GLSIKEVALT LGYNQTSPYI
VMFKKYAQYS PEQYRRQLA
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