Gene SO_1053.2 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1053.2 
Symbol 
ID1168893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1092427 
End bp1093164 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content50% 
IMG OID637343012 
Producthypothetical protein 
Protein accessionNP_783466 
Protein GI28275209 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAT ATTTCTTAGG AGTCAGTTTG GAGTCACTTA AGTCACTGCC GCGCCAAACC 
AATCATTTGC GTCTTGGGCT TGCCATGTGG TCACATTACC ATTGGCAAGA TAGTGTTTAT
GGTTCAACAA CCAAACAAGC CGAGCGCCTT GCCCGTTATG CAACCATTTT TAACACGGTA
GAAGGGAATA CCAGTTTTTA CGCTACGCCA AATGCACAAA CTATGATGAA CTGGCTCAGA
GCTACCCCAG ATGACTTTCG CTTTACCTTT AAGCTACCGC AGACGATCAC CCATCAAAAG
CAACTACAGC ATTGTCAGCA GGAGCTTCTG CAATTCTTTC AAGTCATGTC GCCCTTGGCA
GAAAAAACCG GGCTATGGAA GATCCAACTT CCCGCCCATT TCGGCCCAGA AAACTTGCCT
GCGTTAGCGC AATTTCTCAA TCAAGTCCCC CAAGGGTTAA CCTATGGCGT CGAAGTCAGG
CATGCTGCGT TTTTTGCCAA GGGAGAGGCT GAGCGAGCGC TAAACCGCTT GCTGATGGAT
AAACAGGTGA ACCGCATCAT TATGGACAGT CGGCCACTGT TTGCTCTGCC ACCCGCTAAC
GAGGCGATTA TCGATACCCA TAAGAAAAAA CCGCGGGTGC CAGTGCATGC AATCGCGACT
GCCAATACGC CTGTGGTTCG CTTTATCGGG CAACCTGACG ATGCATGCAG TTGCACAACT
CGCGCAGCAA GGCGTTAG
 
Protein sequence
MDSYFLGVSL ESLKSLPRQT NHLRLGLAMW SHYHWQDSVY GSTTKQAERL ARYATIFNTV 
EGNTSFYATP NAQTMMNWLR ATPDDFRFTF KLPQTITHQK QLQHCQQELL QFFQVMSPLA
EKTGLWKIQL PAHFGPENLP ALAQFLNQVP QGLTYGVEVR HAAFFAKGEA ERALNRLLMD
KQVNRIIMDS RPLFALPPAN EAIIDTHKKK PRVPVHAIAT ANTPVVRFIG QPDDACSCTT
RAARR