Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1053.2 |
Symbol | |
ID | 1168893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1092427 |
End bp | 1093164 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343012 |
Product | hypothetical protein |
Protein accession | NP_783466 |
Protein GI | 28275209 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAT ATTTCTTAGG AGTCAGTTTG GAGTCACTTA AGTCACTGCC GCGCCAAACC AATCATTTGC GTCTTGGGCT TGCCATGTGG TCACATTACC ATTGGCAAGA TAGTGTTTAT GGTTCAACAA CCAAACAAGC CGAGCGCCTT GCCCGTTATG CAACCATTTT TAACACGGTA GAAGGGAATA CCAGTTTTTA CGCTACGCCA AATGCACAAA CTATGATGAA CTGGCTCAGA GCTACCCCAG ATGACTTTCG CTTTACCTTT AAGCTACCGC AGACGATCAC CCATCAAAAG CAACTACAGC ATTGTCAGCA GGAGCTTCTG CAATTCTTTC AAGTCATGTC GCCCTTGGCA GAAAAAACCG GGCTATGGAA GATCCAACTT CCCGCCCATT TCGGCCCAGA AAACTTGCCT GCGTTAGCGC AATTTCTCAA TCAAGTCCCC CAAGGGTTAA CCTATGGCGT CGAAGTCAGG CATGCTGCGT TTTTTGCCAA GGGAGAGGCT GAGCGAGCGC TAAACCGCTT GCTGATGGAT AAACAGGTGA ACCGCATCAT TATGGACAGT CGGCCACTGT TTGCTCTGCC ACCCGCTAAC GAGGCGATTA TCGATACCCA TAAGAAAAAA CCGCGGGTGC CAGTGCATGC AATCGCGACT GCCAATACGC CTGTGGTTCG CTTTATCGGG CAACCTGACG ATGCATGCAG TTGCACAACT CGCGCAGCAA GGCGTTAG
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Protein sequence | MDSYFLGVSL ESLKSLPRQT NHLRLGLAMW SHYHWQDSVY GSTTKQAERL ARYATIFNTV EGNTSFYATP NAQTMMNWLR ATPDDFRFTF KLPQTITHQK QLQHCQQELL QFFQVMSPLA EKTGLWKIQL PAHFGPENLP ALAQFLNQVP QGLTYGVEVR HAAFFAKGEA ERALNRLLMD KQVNRIIMDS RPLFALPPAN EAIIDTHKKK PRVPVHAIAT ANTPVVRFIG QPDDACSCTT RAARR
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