Gene SO_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1009 
SymbolnuoN 
ID1168849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1045281 
End bp1046744 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content62% 
IMG OID637342969 
ProductNADH dehydrogenase subunit N 
Protein accessionNP_716637 
Protein GI24372595 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTCT CCGCTTCCCA ACTGCTGGCA CTGCTTCCCC TGCTGCTGAC CACCGGGGCC 
ATGGCGGCCC TGATGCTGGC CATCGCCTGG CGCCGCTGTG TCACCACCGC CTTTACCGTG
ACCATTGTTG GCCTCAACAT GGCACTGTTC TCGCTGCCCA TCGTGATGGC GCAGGGGGAT
CAGGGGGTCA CCCCGCTGCT GCAAGTGGAC AGTTACGCCG TCTTCTACAT GGGACTGGTT
CTGATCGGCG CTCTGGCCAC CTGTACCTTC GGTCAGTCCT GGCTGAAAGC CTACCCGGAC
AACAGGGAGG AGTTCTTCCT GCTGCTGTTG ATCGCCACAG CCGGTGGTCT GGTGCTAGCT
TGCTCCCGCC ACCTCGCCTC CCTGTTTATC GGGATCGAGA TGCTGACCCT GCCGATGTTC
GGTCTGGTGG GCTACGCCTA CCGCGAGCGC CACTCGCTGG AAGCCGCGGT GAAATACATG
GTGCTTTCTG CCGCCGCCAC CGCCTTCCTG CTGTTTGGCA TGGCGCTGCT CTATGCACAG
GCAGGCAGCC TGAGCTTTGC CGCCCTGGGG CAGACCCTGG CCGAGAGCCC GGCTCACCAC
CCACTGCTGA TGGGCGGTTT GGGGTTAATG CTGGTCGGCT TTGCCTTTAA ATTGTCGCTG
GCCCCCTTCC ACCTCTGGAC CCCGGATGTC TATGAAGGTG CCCCGGCACC GGTCGCCACC
TTCCTCGCCA CCGTCAGCAA GGTGGCGGTC TTTGCCGTGT TGCTGCGCTT CTATCTGGCG
GTCCCGGCGG CGAGCGATCC CATGATCCAC TGGCTGCTGG CTGCTATGGC GGTCATCTCC
ATCCTCGTCG GCAACCTGCT GGCACTGGTG CAGACCAACG TCAAACGGAT GCTGGGCTAC
TCCTCCATCT CCCACTTTGG TTATCTGCTG GCGGTGATCG TGGCGAGCCG CATCGGCCAG
ATGCCGGTGG AAGCGGCCGG GGTCTATCTG CTGATGTATC TCTTCACCAG TCTGGGTGCC
TTTGGCGTGG TGAGCATGAT GTCGAGCCCC TATCGCGGCA AGGATGCAGA CTCCCTGCAC
AGCTATCGCG GCCTGTTCTG GAAGCGTCCT TACCTCACCG CCGTGCTGAC GGTGATGATG
CTCTCTCTGG CCGGTATTCC GATGACGCTC GGCTTTATCG GCAAGTTCTA CCTCATCGGC
GTCACCGTCG AGGCACAGCT CTGGTGGCTC TCCGGTGCCA TCGTGCTCGG CAGCGCCCTG
GGTCTCTACT ACTACCTCAA GGTGATGGTG ACCCTCTATC TGCGCGAACC GGGCATGCAG
CAGCGGGATG CCAGCGCCGA CTGGGCACTC TCCTCCGGTG GCGTGGTAGT ACTGCTCTCT
GCCGCGCTGG TGGTGTTGCT GGGACTCTAT CCCCAGCCGG TCATCACTCT GGTGCAGGGT
TTCCAGCACG TGGTGTTGCA GTAA
 
Protein sequence
MTFSASQLLA LLPLLLTTGA MAALMLAIAW RRCVTTAFTV TIVGLNMALF SLPIVMAQGD 
QGVTPLLQVD SYAVFYMGLV LIGALATCTF GQSWLKAYPD NREEFFLLLL IATAGGLVLA
CSRHLASLFI GIEMLTLPMF GLVGYAYRER HSLEAAVKYM VLSAAATAFL LFGMALLYAQ
AGSLSFAALG QTLAESPAHH PLLMGGLGLM LVGFAFKLSL APFHLWTPDV YEGAPAPVAT
FLATVSKVAV FAVLLRFYLA VPAASDPMIH WLLAAMAVIS ILVGNLLALV QTNVKRMLGY
SSISHFGYLL AVIVASRIGQ MPVEAAGVYL LMYLFTSLGA FGVVSMMSSP YRGKDADSLH
SYRGLFWKRP YLTAVLTVMM LSLAGIPMTL GFIGKFYLIG VTVEAQLWWL SGAIVLGSAL
GLYYYLKVMV TLYLREPGMQ QRDASADWAL SSGGVVVLLS AALVVLLGLY PQPVITLVQG
FQHVVLQ