| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0946 |
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| Symbol | |
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| ID | 1168792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 980436 |
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| End bp | 981563 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342913 |
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| Product | hypothetical protein |
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| Protein accession | NP_716575 |
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| Protein GI | 24372533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA AGGAGACACC GGAGCAGAAA CCCGAAGATA TGCCGATACC GATTGTGGAT
ATCACATCGG TTGAGCAACA AACAGTATCA CTTAACTTAC CCTCCTATGG CGTTGTCACC
CCGAAATATA AGACGCAATT GGTGACCGAA GTACAAGGAC GAATGCTGAC GATATCGCCG
CAGTTTGTTG CCGGTGGCAT AGTGAAGAAA GGCGACCAGC TCGCCCAAAT CGAACCATCT
GATTACGAAG CCGACTTAAT GCAAGCCGAG GCGACCTTGG CTCAGGCCAC CGCAGCTCTT
AATGAGGAAA TCGCCCGTGG CGAAGTCGCC AAAATTGAGT TTAAAGGCTA CGACAAAGGG
TTACCGCCTG AACTCGGTTT ACGTATTCCA CAGTTGAAAA AAGAACAAGC CAATGTGAAA
TATGCGCAGG CGGCCCTAGC ACGTGCCCAA CGCAATTTAG AACGCACCAT TATTCGCGCC
CCTTTCGACG GCATTATAAA AGCAAGAAAT GTCGATTTAG GTCAATACGT TACCTTAGGT
ACTAATCTAG GTGAACTGTA TGACACCAGT ATTGCGGAAA TCCGTTTGCC TATATCCAAT
GATGATTTGG CCTATTTAGA ATCGGTCGAT AATCCTGACA CCCAAGTCAC CTTAAGCGCC
TCTCTGGCAG GTAAGGAGAA TACTTGGATA GGCAATATCA TTCGCAGTGA AGGAGTTATT
GATGCCGATA ACCGCATGGT TTACCTCGTC GCCGAGATTA AAGATCCTTA CCTACGTGAG
CACAAAACCC AAGGCAGTTT ACCCTTAAAA TACGGTAGCT TTGTCAATGC GGTGATCAAA
GGCCGCACTG TGGATGGTAT CGTGAAACTG CCTCGCCATG TGGTGCGTAA TGAGCATGTT
GCCTTAATTA ACGACAATAA TATTGTCGAG ATGCGCCATG TGAATGTGGT CCGTAGCGAC
CTTCAAAACG TGTTTATCAA GGACAGCTTA AAAACCGGTG AACGGGTTGC TATTACTCAC
TTTAATAACA TGGCCAATGG CCAATTAGTC AAAGTGATAG GCGAAGAGAC AAAACCTGCG
CAAACGCCTG CTCCTGAGTC GAGTCTAGCG GCTACTGGAG TGAAATAA
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| Protein sequence | MKTKETPEQK PEDMPIPIVD ITSVEQQTVS LNLPSYGVVT PKYKTQLVTE VQGRMLTISP
QFVAGGIVKK GDQLAQIEPS DYEADLMQAE ATLAQATAAL NEEIARGEVA KIEFKGYDKG
LPPELGLRIP QLKKEQANVK YAQAALARAQ RNLERTIIRA PFDGIIKARN VDLGQYVTLG
TNLGELYDTS IAEIRLPISN DDLAYLESVD NPDTQVTLSA SLAGKENTWI GNIIRSEGVI
DADNRMVYLV AEIKDPYLRE HKTQGSLPLK YGSFVNAVIK GRTVDGIVKL PRHVVRNEHV
ALINDNNIVE MRHVNVVRSD LQNVFIKDSL KTGERVAITH FNNMANGQLV KVIGEETKPA
QTPAPESSLA ATGVK
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