| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0925 |
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| Symbol | |
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| ID | 1168771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 954005 |
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| End bp | 955012 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637342892 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_716554 |
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| Protein GI | 24372512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACCAG ATGCTATTAA TCCCCAAATG AGTGTGCTGG ACAACGATCT GCTTCAGGTC
AATTTAGGCC GATGGATGCA ACAATGCGAA TTAATTAAAA GTTACTACAA CGCTAGCCAC
GTATTTGTAT TGCAGATGAC TCATTCTGGT TTTGAAGTCA TTGTCAGCTC AGTCAGCGAA
ACGCCTCTTT TTACCTCGGG CACGCTTTTT CAACGTAATT TTCCACTCTT TCAAACATTA
GAGAATAGTA ACCTCGAAGG AGACTACCTC AATTTAAGCC GTTTTATGCT CGATGAACTG
CCTAGGGATT TTGACGGTAT TCAATACATT CTTTCCCGCC CTATCGCTTG GCCTGACGGC
TGTCAGTTTG GTTCGTTATG TGTATTAAAT CCCCATATGG CCGATCCTTT AAGCAACAGC
GCCATGCTTG AGCCTTTCCA AATTTTGCTG CAACAGGAAT TATCCCTGCT TTGCCAAAAT
CATCGTATCG AGTCACTATC GATGCGCGAT CAAGAGACAG GTATGCTCAA CCATTACGGC
TTTATGATGA TGGCGCCAAG GCAGCTCAAT CTGGGGCGAC GCTTTGGCGC CCATGCGGGA
ATTATTTTCT TTAAATTAAC CGAATCGACC GAAAACACCT TAGAGGAGAA ACACCACAGG
CTGCTCGGTA ATCTGATCCA AGATACGATT CGTACTGCAG ATGTGGCCGC TCACTTGAGT
GCGACCCAAT TTGTGGTGTT AGCCTTTATC GACGGTGAGC GCGATATATT GCATATTGTA
AAGCGAGTAG AAAAACAATT AGAGCAACAA AACCCTCATC TTAAGCTCGA CACTGGCTAT
AGTTTTTTTG CCCCTGAATC GACAGCCAAA CTCGCCCCCA TGATGGAAGA TGCCCGTGGA
AAATTAACAT CTATGTCGCC AAAAAACACC CAGACCAACG GCAATCAGAC GCAAATCATC
AATGCAGCGC TTTATGATAA TCCCTCAGTT GACTCCGCCG AGCTTTAA
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| Protein sequence | MLPDAINPQM SVLDNDLLQV NLGRWMQQCE LIKSYYNASH VFVLQMTHSG FEVIVSSVSE
TPLFTSGTLF QRNFPLFQTL ENSNLEGDYL NLSRFMLDEL PRDFDGIQYI LSRPIAWPDG
CQFGSLCVLN PHMADPLSNS AMLEPFQILL QQELSLLCQN HRIESLSMRD QETGMLNHYG
FMMMAPRQLN LGRRFGAHAG IIFFKLTEST ENTLEEKHHR LLGNLIQDTI RTADVAAHLS
ATQFVVLAFI DGERDILHIV KRVEKQLEQQ NPHLKLDTGY SFFAPESTAK LAPMMEDARG
KLTSMSPKNT QTNGNQTQII NAALYDNPSV DSAEL
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