| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0852 |
|---|
| Symbol | |
|---|
| ID | 1168699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 874489 |
|---|
| End bp | 874896 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637342822 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716483 |
|---|
| Protein GI | 24372441 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4967] Tfp pilus assembly protein PilV |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAA TGGAATATCG CATTAAACAA CAGGGCTTTA CCATGACTGA AGTGCTAGTT
TCGTTAGTGG TTTCCGTCAC ATCTTTACTG GCGCTCGGCA AGGCACAATT ATCTTCACTA
CAACATGCCA CCAATAGCTT CTATTATACC GTTGCAACGA TACAAGCTCA GAATGTGATA
GAACGGATCT GGCCAAGGAT CTGCGACATT CAGCGCCAGC CCGCGCGCTT TGAGGATGTC
AATTTTAGGG CCAGCCTCAG CCAAGGTATG CCAAGCGGTT TTAATCCGAT ATTACCTAAC
ACTTATCAGG ATACTATGCC TATCACAGTC ACTTGGCAGG ATGGGCGCAT TGAAAATCAA
AACAGCGTCA GCCTTAATGC TAGCTTTCCA CACTTGTGTC AGGCTTAG
|
|---|
| Protein sequence | MRVMEYRIKQ QGFTMTEVLV SLVVSVTSLL ALGKAQLSSL QHATNSFYYT VATIQAQNVI
ERIWPRICDI QRQPARFEDV NFRASLSQGM PSGFNPILPN TYQDTMPITV TWQDGRIENQ
NSVSLNASFP HLCQA
|
|---|
| |