| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0772 |
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| Symbol | |
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| ID | 1168627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 785081 |
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| End bp | 785800 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342750 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_716403 |
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| Protein GI | 24372361 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTC CCATTATTAT CACTGGCGTG GGTAAACGTA TTGGCTACGC CCTCGCGAAA
CACTTGCTCG CCCAAGGGCA CAAGGTGATT GGCACTTACC GCAGCCATTA TCCCAGCATC
GATGAGTTGC AGTCTTTGGG CGCGACCTTA ATTCAATGCG ATTTTTACGA CAATGCTCAA
GTACAAAACC TGATTGAGCA ATTGAGCCAG TACCCCAAGT TTCGCGCCAT TATCCATAAT
GCCTCTGACT GGCTGGCGGA TAACAGTCCC GAATTTGCCG CCCATGAGGT GATGCAGCGG
ATGATACAGG TACATGTGAA CGTGCCCTAT CAAATGAATT TGGCCTTGGC TTCGAAATTA
CAAGCGGGGG CCGAAGGGGA AATTGGTGCT AGCGATATTA TCCATATCAC CGACTATGTG
GCCGAAAAGG GCAGTGCGAA ACATATCGCC TATGCGGCCA GTAAAGCGGC GCTAGACAAT
TTAACCTTAT CCTTTGCGGC TAAATTAGCG CCCGAGGTCA AAGTGAATGC GATTGCTCCG
GCGATGATCC TCTTTAATCC AAGTGATGAT GAAGCCTATC GACAAAAGAC CTTAGCCAAG
GCTATTTTGC CAAAAGAAGC GGGAAATCAT GAGATTATCG AACTAATGGA ATATCTGCTT
AATAGCCGTT ATGTCACCGG ACGTAGTCAT CATGTCGATG GTGGGCGGCA TTTAAGGTAA
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| Protein sequence | MTAPIIITGV GKRIGYALAK HLLAQGHKVI GTYRSHYPSI DELQSLGATL IQCDFYDNAQ
VQNLIEQLSQ YPKFRAIIHN ASDWLADNSP EFAAHEVMQR MIQVHVNVPY QMNLALASKL
QAGAEGEIGA SDIIHITDYV AEKGSAKHIA YAASKAALDN LTLSFAAKLA PEVKVNAIAP
AMILFNPSDD EAYRQKTLAK AILPKEAGNH EIIELMEYLL NSRYVTGRSH HVDGGRHLR
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