Gene SO_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0598 
SymbolyjeF 
ID1168465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp623398 
End bp624897 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content51% 
IMG OID637342590 
ProductyjeF protein 
Protein accessionNP_716231 
Protein GI24372189 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG ATTTATCGAG TTTACCCACA GCGCTTTTTA CTCAGGAGCA GGTGAGGGAC 
GCCGAACTGC TCGCAGTTTC AGAAGGTAAA ACCACATTAT ATCAATTGGT TGAACGTGCT
GGGCGTGCTG CGTTTGACTG TTTAGCTACG CAGATAGCAC GTCAGCCTAG GCTTGAGTCT
ATGCCATTAC TGGTACTCGC AGGCAGTGGA AATAATGGTG CCGATGCCTT AGTTTGTGCA
CGCCTTGCCT TAGAGGCCGG GCATAAGGTC ATGGTTTTCT TACTAAAGAC CAAAGGAACG
CCTGAATTTG AGCAAGCACT TTCGGCCTAT CTAAATCAAG GCGGTATAGC CGACTCTCCC
AATATCGACG CGATCTTGCA GGCGCCAATG CTTATCGATG GGTTGCTCGG GACTGGTGTT
CATGGTGGTG TGCGTGAGGA GGTTGCCGCA CTTATCCAAG CTATTAATCA GAGCGATGCT
TGGGTGCTTA GTTTAGATCT TCCTTCCGGG ATCGTTGCCG ATACCGGTGT TGTTGCTCAA
GCTGCAGTGA TGGCTGATCT GACGTTGTGC TTTGGCGGAT TGAAACAAGG CCTGCTTACC
AGTAAGGCGA GACATTATTG CGGTGATCTT GACTTTGCCG ATCTGGGATT AACGCCATTT
TTTAAGACGC CAAATGCGAC TCGAGTGGGC GGTGAGATTT TAAAAAGCTA TTTTGCCGCC
AGAGCAAGGG ATAGCCACAA AGGTCAATCG GGTAAAGTGA CGTTGATTGG TGGTGATTTT
GGGATGGCAG GAGCGATTCG CCTTGCTAGT GAGGCGTGTT TGCGTGCGGG TGCCGGATTA
GTCACAGTGA TCAGCAGGCC AGAGCATCAA CTTACCGTGA ATGTGTCTCG CCCTGAGTTA
ATGTTTTGGG GCTGCGAGCT GGTCGATATG GAGGTGTATC TGCGCCTTGG TTGGGCTCAG
GTGGTCGTGC TTGGCCCTGG TTTAGGTAAA CATGATTGGG GCTATAACTT GTTTAAAGCT
GCGGGGTTAA GTGATAAACC CTGCGTACTC GATGCTGATG CTTTGAATTT ACTCAGCAAT
GAACCTCGCA GACAAACCAA CTGGGTGCTT ACGCCCCATC CTGGTGAAGC CGCGCGGCTG
TTAGGGTGCA ATGTGGCCGA GATTGAACAG GACAGATTTG CTGCCGTACG TGCCTTACAG
CAAAAATACG GTGGGGTAGT ACTGCTTAAA GGCGCTGGCA CAGTAATTTT TGATGGTAAG
CAGATGGTTG TGGCGCCTGT TGGCAACCCC GGACTTGCGA GTGGTGGGTG CGGCGATGTG
TTATCTGGTA TTATAGGCGC ACTGATGGCT CAGGGGATGG ATAACATGCA GGCGACTGTG
GTTGGAGTCG TTGTTCATGG TTGTGCTGCG GATCTTGCTG CGGTACAAGG TGAGCGGGGG
ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
 
Protein sequence
MAQDLSSLPT ALFTQEQVRD AELLAVSEGK TTLYQLVERA GRAAFDCLAT QIARQPRLES 
MPLLVLAGSG NNGADALVCA RLALEAGHKV MVFLLKTKGT PEFEQALSAY LNQGGIADSP
NIDAILQAPM LIDGLLGTGV HGGVREEVAA LIQAINQSDA WVLSLDLPSG IVADTGVVAQ
AAVMADLTLC FGGLKQGLLT SKARHYCGDL DFADLGLTPF FKTPNATRVG GEILKSYFAA
RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL
MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSN
EPRRQTNWVL TPHPGEAARL LGCNVAEIEQ DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK
QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG
MLASDLMPFI RQLVNSDLL