Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0598 |
Symbol | yjeF |
ID | 1168465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 623398 |
End bp | 624897 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637342590 |
Product | yjeF protein |
Protein accession | NP_716231 |
Protein GI | 24372189 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAG ATTTATCGAG TTTACCCACA GCGCTTTTTA CTCAGGAGCA GGTGAGGGAC GCCGAACTGC TCGCAGTTTC AGAAGGTAAA ACCACATTAT ATCAATTGGT TGAACGTGCT GGGCGTGCTG CGTTTGACTG TTTAGCTACG CAGATAGCAC GTCAGCCTAG GCTTGAGTCT ATGCCATTAC TGGTACTCGC AGGCAGTGGA AATAATGGTG CCGATGCCTT AGTTTGTGCA CGCCTTGCCT TAGAGGCCGG GCATAAGGTC ATGGTTTTCT TACTAAAGAC CAAAGGAACG CCTGAATTTG AGCAAGCACT TTCGGCCTAT CTAAATCAAG GCGGTATAGC CGACTCTCCC AATATCGACG CGATCTTGCA GGCGCCAATG CTTATCGATG GGTTGCTCGG GACTGGTGTT CATGGTGGTG TGCGTGAGGA GGTTGCCGCA CTTATCCAAG CTATTAATCA GAGCGATGCT TGGGTGCTTA GTTTAGATCT TCCTTCCGGG ATCGTTGCCG ATACCGGTGT TGTTGCTCAA GCTGCAGTGA TGGCTGATCT GACGTTGTGC TTTGGCGGAT TGAAACAAGG CCTGCTTACC AGTAAGGCGA GACATTATTG CGGTGATCTT GACTTTGCCG ATCTGGGATT AACGCCATTT TTTAAGACGC CAAATGCGAC TCGAGTGGGC GGTGAGATTT TAAAAAGCTA TTTTGCCGCC AGAGCAAGGG ATAGCCACAA AGGTCAATCG GGTAAAGTGA CGTTGATTGG TGGTGATTTT GGGATGGCAG GAGCGATTCG CCTTGCTAGT GAGGCGTGTT TGCGTGCGGG TGCCGGATTA GTCACAGTGA TCAGCAGGCC AGAGCATCAA CTTACCGTGA ATGTGTCTCG CCCTGAGTTA ATGTTTTGGG GCTGCGAGCT GGTCGATATG GAGGTGTATC TGCGCCTTGG TTGGGCTCAG GTGGTCGTGC TTGGCCCTGG TTTAGGTAAA CATGATTGGG GCTATAACTT GTTTAAAGCT GCGGGGTTAA GTGATAAACC CTGCGTACTC GATGCTGATG CTTTGAATTT ACTCAGCAAT GAACCTCGCA GACAAACCAA CTGGGTGCTT ACGCCCCATC CTGGTGAAGC CGCGCGGCTG TTAGGGTGCA ATGTGGCCGA GATTGAACAG GACAGATTTG CTGCCGTACG TGCCTTACAG CAAAAATACG GTGGGGTAGT ACTGCTTAAA GGCGCTGGCA CAGTAATTTT TGATGGTAAG CAGATGGTTG TGGCGCCTGT TGGCAACCCC GGACTTGCGA GTGGTGGGTG CGGCGATGTG TTATCTGGTA TTATAGGCGC ACTGATGGCT CAGGGGATGG ATAACATGCA GGCGACTGTG GTTGGAGTCG TTGTTCATGG TTGTGCTGCG GATCTTGCTG CGGTACAAGG TGAGCGGGGG ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
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Protein sequence | MAQDLSSLPT ALFTQEQVRD AELLAVSEGK TTLYQLVERA GRAAFDCLAT QIARQPRLES MPLLVLAGSG NNGADALVCA RLALEAGHKV MVFLLKTKGT PEFEQALSAY LNQGGIADSP NIDAILQAPM LIDGLLGTGV HGGVREEVAA LIQAINQSDA WVLSLDLPSG IVADTGVVAQ AAVMADLTLC FGGLKQGLLT SKARHYCGDL DFADLGLTPF FKTPNATRVG GEILKSYFAA RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSN EPRRQTNWVL TPHPGEAARL LGCNVAEIEQ DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG MLASDLMPFI RQLVNSDLL
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