| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0544 |
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| Symbol | |
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| ID | 1168412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 564464 |
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| End bp | 566617 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342536 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_716180 |
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| Protein GI | 24372138 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA GTAATCACTA TAAACCCGTT ACCATTCTGT TGGTTGATGA CGACGACGTG
GATTATATAG CTGTACAGAG GGCGATGAAG CGATTGCGGC TGCTAAACCC TTTGGTGCGC
GCGCGGGATG GGCTGGAAGC GCTAACAATT CTCACCAATA CGGACGCCAT AAAAGGCGCT
TATTTGATCT TGCTTGATCT CAATATGCCG AGAATGAACG GTTTTGAATT TCTTGAGCAT
ATTCGTTCCG ATCCCATTTT GTCCTCTTCA GTGGTGTTTA TGCTGACCAC TTCCTGTACT
GATGAAGATC GAATGAAAGC CTACAGCCAT CATGTCGCTG GCTATATGGT GAAAACGGAT
ATCAAATATG GTTTCCATAA TATTTTTAAT ATGTTGGAAG GCTACTGGCG CATCGTTGAA
TTGCCAAGTG TATAG
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| Protein sequence | MDTDRFPESF GPPKSFFISV VRSSWLMLVA ALTFMGISWF VLQEYLRERG EERFNNNVQE
LSEAVSRRMT AYEQVLRGGV GLFLSSRGVT RSEWQTYVAN ARLSDYYPGI QGLGFAELVT
PATLDEFTQQ VQQEGFSDFR ITPIGDRELY CVIKYLEPFD WRNQRAFGFD MCSEATRRSA
ILKAITSGLP KVSGKVTLVQ ETPENTQAGV LMYVPLYRGQ PMTEVERMQQ AIGVVYALFR
MNDLMQGIMG KRFSGIKLAI YDGSEANRTH LMFSSDPKLP SSKDVFYQSQ LETMEGQVWR
IDVSSESRFI SRAEQTRSVW LQVIGCAFIL ALFYAVISMA RNRYQESMLT AELIANEKRF
RLIIEASPSA LFMVDKTGVI TLVNTQGERL FGYTREELLG RSINMLLPET LREIHQQHLS
HYLVHPIAKN MSMRDDLLGC CKDGTPLAVE VGLTPVHFSN GIYILTTINN ISERKRIEAQ
RIEHMAELER INQELDRFAY IASHDLKSPL RGIEQLTTWL SEDLVDNTNE NVQKYLGLIQ
NRIQRMVRLL DGLLTFSRIG RVDNEMVEVD SRQLVEDMFA LVAPPQGFEL VLEGDFPHFK
TVKTLLELVV RNLISNAIKH HDRGFGVLKV LCETKNTYYW FSVVDDGPGI SSEFQLKVFE
MFQTLRPRDE VEGSGLGLSL VKKTVDSLGG KIQLESVGRG CCFRFSWPIH IVNKEGI
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