Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0544 |
Symbol | |
ID | 1168412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 564464 |
End bp | 566617 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637342536 |
Product | sensory box histidine kinase |
Protein accession | NP_716180 |
Protein GI | 24372138 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATA GTAATCACTA TAAACCCGTT ACCATTCTGT TGGTTGATGA CGACGACGTG GATTATATAG CTGTACAGAG GGCGATGAAG CGATTGCGGC TGCTAAACCC TTTGGTGCGC GCGCGGGATG GGCTGGAAGC GCTAACAATT CTCACCAATA CGGACGCCAT AAAAGGCGCT TATTTGATCT TGCTTGATCT CAATATGCCG AGAATGAACG GTTTTGAATT TCTTGAGCAT ATTCGTTCCG ATCCCATTTT GTCCTCTTCA GTGGTGTTTA TGCTGACCAC TTCCTGTACT GATGAAGATC GAATGAAAGC CTACAGCCAT CATGTCGCTG GCTATATGGT GAAAACGGAT ATCAAATATG GTTTCCATAA TATTTTTAAT ATGTTGGAAG GCTACTGGCG CATCGTTGAA TTGCCAAGTG TATAG
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Protein sequence | MDTDRFPESF GPPKSFFISV VRSSWLMLVA ALTFMGISWF VLQEYLRERG EERFNNNVQE LSEAVSRRMT AYEQVLRGGV GLFLSSRGVT RSEWQTYVAN ARLSDYYPGI QGLGFAELVT PATLDEFTQQ VQQEGFSDFR ITPIGDRELY CVIKYLEPFD WRNQRAFGFD MCSEATRRSA ILKAITSGLP KVSGKVTLVQ ETPENTQAGV LMYVPLYRGQ PMTEVERMQQ AIGVVYALFR MNDLMQGIMG KRFSGIKLAI YDGSEANRTH LMFSSDPKLP SSKDVFYQSQ LETMEGQVWR IDVSSESRFI SRAEQTRSVW LQVIGCAFIL ALFYAVISMA RNRYQESMLT AELIANEKRF RLIIEASPSA LFMVDKTGVI TLVNTQGERL FGYTREELLG RSINMLLPET LREIHQQHLS HYLVHPIAKN MSMRDDLLGC CKDGTPLAVE VGLTPVHFSN GIYILTTINN ISERKRIEAQ RIEHMAELER INQELDRFAY IASHDLKSPL RGIEQLTTWL SEDLVDNTNE NVQKYLGLIQ NRIQRMVRLL DGLLTFSRIG RVDNEMVEVD SRQLVEDMFA LVAPPQGFEL VLEGDFPHFK TVKTLLELVV RNLISNAIKH HDRGFGVLKV LCETKNTYYW FSVVDDGPGI SSEFQLKVFE MFQTLRPRDE VEGSGLGLSL VKKTVDSLGG KIQLESVGRG CCFRFSWPIH IVNKEGI
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