| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0409 |
|---|
| Symbol | |
|---|
| ID | 1168286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 426070 |
|---|
| End bp | 426606 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637342411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716047 |
|---|
| Protein GI | 24372005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATA ACGTTAAAGC ATTACTCGCC ACGACCGCGT TATTTTTTAG TTGCCAAGTA
CTAGCAAATG GCGGCTGTGG CTTTGAAGAG CAAAAACAGG GCTTGATTGC CACCTGCAGC
GAGGAGAAGC AAGAAGTGAT TTTAACCGGT GTAGTTGAAG CGCAACATTT AGTAAAAGAT
CTCAATGAGT TTGCTGAAGG CTACAAAAGC TACCAAGTCG ATACCGACGC CTTAGCACCA
CTCAAAAAAG TTACGGAACC AACAGAAATC GTAGTGATTA TTGGTACTTG GTGCCCAGAC
TGCCATCGCG AAACGCCACG TTTTATCCGC ATTATCGAAG AAGTGGCCAA CCCCAATATC
AAAGTGACTT ATATTGGCGT CGATCGCAGC AAGCAAGATC CTGAAGGGCT GGCGGCAAAA
TACGAGTTTA AACGCATCCC CACCTTTATC GTGCAACAAC AAGGTAAAGA AATTGGCCGT
ATCGTAGAGC GTCCAACCGT ATCGCTCGAA AAAGACTTAG CCGAAATATT GAAATAA
|
|---|
| Protein sequence | MHNNVKALLA TTALFFSCQV LANGGCGFEE QKQGLIATCS EEKQEVILTG VVEAQHLVKD
LNEFAEGYKS YQVDTDALAP LKKVTEPTEI VVIIGTWCPD CHRETPRFIR IIEEVANPNI
KVTYIGVDRS KQDPEGLAAK YEFKRIPTFI VQQQGKEIGR IVERPTVSLE KDLAEILK
|
|---|
| |