Gene SO_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0408 
SymbolgppA 
ID1168285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp425050 
End bp425970 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID637342410 
Productguanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 
Protein accessionNP_716046 
Protein GI24372004 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAC CTGCTTATGC TGCCATTACT TTAGGCTCTA ACAGTTTTAA TATGCTGATC 
GCTAAGACAA AAGGCGATCA GCCACATATT ATTGCTAAAT ATAAACGTAA AGTCAGGTTA 
GCCGAAGGGA TTGGCGAAGA TGGTTATTTA TCACAGGAAG TGATGCAGCG AGGCTTAGAT 
TGCCTCGCCA TGTTTGCCCA AATGTTAACA CTGCATAAAA TCCATCCCAA TCATGTTGCT 
GTGATTGCCA CAGCAACACT GCGTACCATC AATAACGCCG ACGAGTTTAA CCAGAAGGCC 
ATTCCTCTCC TTGGTCACCC AATTGAGATT ATTTCGGGCA TGCGTGAAGC TGAACTGATT 
TATCAAGGTA TGGTGGCAAC AACCTGTGGC CAAGGTCGAC GCTTAGTGAT TGATATTGGT 
GGAGCAAGCA GCGAATTTAT TATCGGTGAT GGTCATCAAG TCCAATTTAA AACTAGCTTG 
CCGATGGGCA GTGTGACCTT TAATCGACGC TTCTTTAGCA ACGCGCCGGT GCAAGAACTC 
GACTTTGACG ATGCTAAACA GCAAGTGCTG GAAGTGCTAG GTGAGCATAG ACAAAGGCTA 
AAAGACTTAG GGTGGCATTG TGTGGTTGGG GCTTCTGGCG CGGTGCAATC AGTGGTCGAA 
ATCTTGATGC ATCGCAAACT GTCAGAAATC ATCACTTTAT CTGTGTTGAC ACAGCTGAAA 
GCGGAAATCC TTGCCGAGGA GGATGCGAGT CTTTCTGGCA TTATTGGCTT AAGTGTTGAA 
CGTGCGCCGA CATTTGCTGC AGGAGTCGCG ATTTTACTCG CCCTATTTGA GCTTTTGGGT 
CTTGAACAAT TAGCACTATC CGGTGGCGCA TTGCGTGAAG GCGTGTTAGT GATGTTGGCT 
AATCGGATAC TTGAAAGCTA G
 
Protein sequence
MPTPAYAAIT LGSNSFNMLI AKTKGDQPHI IAKYKRKVRL AEGIGEDGYL SQEVMQRGLD 
CLAMFAQMLT LHKIHPNHVA VIATATLRTI NNADEFNQKA IPLLGHPIEI ISGMREAELI 
YQGMVATTCG QGRRLVIDIG GASSEFIIGD GHQVQFKTSL PMGSVTFNRR FFSNAPVQEL 
DFDDAKQQVL EVLGEHRQRL KDLGWHCVVG ASGAVQSVVE ILMHRKLSEI ITLSVLTQLK 
AEILAEEDAS LSGIIGLSVE RAPTFAAGVA ILLALFELLG LEQLALSGGA LREGVLVMLA 
NRILES