Gene SO_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0363 
Symbol 
ID1168240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp373652 
End bp374533 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content49% 
IMG OID637342367 
Producthypothetical protein 
Protein accessionNP_716003 
Protein GI24371961 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG ATTTGACCTT AGTCATTATG GCGGCGGGGC TAGGAAGCCG TTTTGGTGGC 
GACAAGCAAT TGGCCTCCCT TGGCCCTTCG GGCGAACCCA TGTTGGTGTT ATCTATTTTA
TCGGCTATCC GCAGTGGATT TCAGCGCGCT GTTTTAGTGA TCCGCCCAGA GCTTGAGGCG
GAACTTACTG GGATATTGAC GCAGTTTTTA CCCGCAAACT TTGAATATCA CTTTTGTTAC
CAGTCATTAA GTGATTTGCC ACAAGACGCA AAGCTTGCTG ATCTCAGCCA TCGTTTAAAA
CCTTGGGGGA CAGCACATGC GCTTTGGTGT GCCCGCGATT GGGTAAAAGG GCCAATGGCG
GTGATCAATG CCGATGATTT TTACGGTGAC AGCGCCTTTG CCTCACTCGC GAAGGGATTA
ACCGCCAGAC CTAACGATTG GATGATGGTG GCTTATCCTA TCGAGCTGAC GTTATCTGAG
CATGGCGGAG TAAATCGTGG CTTATGCCAA GTTGCACAGG GGCAGTTACG CTCTGTCGCC
GAGTGGTTAA ATATTCAAGC GCAAGATGAT GGTTTTGTTG GCGAAGGCCC AAATGGATTG
GCAAAGCTTC CTCTACAGTC GCTGGTATCC ATGACCTGTT GGGGCTTCTC GCCAAGCATA
TTTAATGTTA TTAAACAGCA ATTAACCGCA TTTATTGAAC AACAGGGCCA ATTGCCGAAA
TCGGAATGCT ATTTGCCCGC GGTGGTTCAG GCGGCAATTG AGCAAGGTGT GCCCGTCTAT
GTTGATGTGG CCAGCGAGCC TTGGCTCGGT GTGACCTATC CGCAGGATAC TGTCTGGGTA
AAGCAAAAAT TAATGGAGTT ATTGGGTGAT AAAACTCATT AG
 
Protein sequence
MNTDLTLVIM AAGLGSRFGG DKQLASLGPS GEPMLVLSIL SAIRSGFQRA VLVIRPELEA 
ELTGILTQFL PANFEYHFCY QSLSDLPQDA KLADLSHRLK PWGTAHALWC ARDWVKGPMA
VINADDFYGD SAFASLAKGL TARPNDWMMV AYPIELTLSE HGGVNRGLCQ VAQGQLRSVA
EWLNIQAQDD GFVGEGPNGL AKLPLQSLVS MTCWGFSPSI FNVIKQQLTA FIEQQGQLPK
SECYLPAVVQ AAIEQGVPVY VDVASEPWLG VTYPQDTVWV KQKLMELLGD KTH