Gene SO_0357 details

Gene Information

• Locus tag: SO_0357
• ID: 1168234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 365794
• End bp: 367647
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342361
• Product: metallo-beta-lactamase superfamily protein
• Protein accession: NP_715997
• Protein GI: 24371955
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2015] Alkyl sulfatase and related hydrolases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAAAAA CTTTGCCATT TAATAACAAA CAAGATTTTG AGGACGCTCA ACGAGGCTTT 
ATTGCTAAAC CTGAAACTCT GACTATTAAG GATGACAAGG GCAATGTCGT TTGGGATCTG 
GAGCAATATA AGACTTATAT AGGCCTCGAT AAGGTTGCAC CGAATACTGT CAACCCCAGC 
CTGTGGCGTA ATGCCCAGCT CAATATGCAG TACGGCTTAT TCAAAGTGAC TGATAAGATT 
TATCAGATTC GTGGGTTTGA TCTTTCAAAT ATTACCTTTA TTGAGGGGGA AAAGGGCTGG 
GTTGTTTTCG ATCCGCTTAT TTCTCCAGAA ACCGCCAAAG CTGCACTTGC TTTTATTAAC 
AAGACGTTGG GAGAGCGTCC AGTGACTGCA GTGGTTTATA GTCATTCTCA TGTGGACCAT 
TACGGCGGTG CTGCTGGGTT ATTTGCTTCG CCAGATGAAG TGTTGAGAAA TAAGGTCGAA 
ATCATTGCTC CAGAGGGATT TACTGAGCAC GCAGTTTCTG AAAACGTTAT CGCGGGTAAT 
GCCATGGCTC GTCGTGCTAT CTATATGTAT GGAGCTTTAT TACCCCGTAA TCCTCAAGGG 
GGAGTCAATG GTGGTTTAGG GCAAACGACT TCAACAGGAA TACCTTCTTT ACTGCTGCCA 
ACTAAATTAA TTGAAAAAAC AGAGGAAGAG GTCACCGTAG ATGGAGTTCG CATGGTGTTC 
CAGTTGACAC CTGGCACTGA GGCCCCTGCT GAGATGAACA CTTGGTTCCC CGATAGCAAG 
GCTCTTTGGA TGGCAGAAAA TACCACTAGC ACTATGCACA ATATTCTCAC TTTAAGGGGA 
GCTCAGGTTC GTGACTCTCT GAAGTGGGCA AGCTTCCTCA ATGAAACAAT TGAAATTTGG 
GGCTCTCAGG CAGAAGTTAA ATTCCAGAGC CATCATTGGC CACGTTGGGG AAACACCTAT 
ATTGTTGATT ATTTCAAGAA GCAGCGGGAT CTATATAAAT ACATCCACGA CCAGTCAGTA 
CGCCTGATGA ACATGGGTTA CACTGGCGAA GAGATCTCGG AGCAAATTGT TTTGCCCCCT 
GAGCTCAATG ACTTCTGGCC GAACCGTGGC TATTACGGTA CCTTGCGTCA CAACAGTCGC 
GCCGTTTATC AACGCTATAT GGGTTGGTAC TCTGGCAACC CTTCGGATTT GGACAATCTA 
CCACCTGAAA TGGTCGGTCC CAAATATATC GAGTTTATGG GCGGCGAAAA GGAGGTATTG 
ATAAAAGCCA AAGCTTCCTT TGATAAGGGT GAATATCGTT GGGTCGCAGA AGTGCTCAAG 
CATCTAGTTT TTGCTAATCC AGACAATAAA GAGGGCAAGC TCTTGCTTGC TGATGCGTTG 
GAACAGCTGG GCTATCAGGC CGAGTCTGGC CCATGGCGCT CAGTCTATCT GCAAGGCGCT 
TATGAGTTAC GTAATGGCGT TCCTTCCGGT GGTGGCACTG TGACTGCTAC ACCAGATACC 
ATTCGTGCAA TGACCCCAAC TATGTTGTTT GAGTATCTGT CTGTGCGTAT CAATCCAGAA 
AAGGCTGCTG GTAAAAAGAT GATCATCAAC ATGAATTTCA CTGACATCGG CGAGAAACAT 
ACCCTGAGTC TGGAAAACGC TGTGCTTAAT CATACGACAC GCTATGCAAC TAAGCCTGAT 
GTAACTATTA CCTTAAGCAA AAAAGTGATG GATGATATTC AGCTCGGTCA GGTCACGTTG 
GAGCAAAAGA TTGCCAGCGG TGATATTAAG ATTGAAGGGG ATCAGCAGAA GTTTAACGAC 
TTCTTCAGCA TGCTTGATAA GTTCAACTTC TGGTTCAACA TCGTTACCCC ATGA 

 

Protein sequence

MQKTLPFNNK QDFEDAQRGF IAKPETLTIK DDKGNVVWDL EQYKTYIGLD KVAPNTVNPS 
LWRNAQLNMQ YGLFKVTDKI YQIRGFDLSN ITFIEGEKGW VVFDPLISPE TAKAALAFIN 
KTLGERPVTA VVYSHSHVDH YGGAAGLFAS PDEVLRNKVE IIAPEGFTEH AVSENVIAGN 
AMARRAIYMY GALLPRNPQG GVNGGLGQTT STGIPSLLLP TKLIEKTEEE VTVDGVRMVF 
QLTPGTEAPA EMNTWFPDSK ALWMAENTTS TMHNILTLRG AQVRDSLKWA SFLNETIEIW 
GSQAEVKFQS HHWPRWGNTY IVDYFKKQRD LYKYIHDQSV RLMNMGYTGE EISEQIVLPP 
ELNDFWPNRG YYGTLRHNSR AVYQRYMGWY SGNPSDLDNL PPEMVGPKYI EFMGGEKEVL 
IKAKASFDKG EYRWVAEVLK HLVFANPDNK EGKLLLADAL EQLGYQAESG PWRSVYLQGA 
YELRNGVPSG GGTVTATPDT IRAMTPTMLF EYLSVRINPE KAAGKKMIIN MNFTDIGEKH 
TLSLENAVLN HTTRYATKPD VTITLSKKVM DDIQLGQVTL EQKIASGDIK IEGDQQKFND 
FFSMLDKFNF WFNIVTP