Gene SO_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0353 
Symbol 
ID1168230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp360341 
End bp361039 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content46% 
IMG OID637342357 
ProductTPR domain-containing protein 
Protein accessionNP_715993 
Protein GI24371951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC TATTACTCCT CTCAAGCCTT GCACTCGCTT GCACATCGGT TGTCGCCGCA 
TCGAGCATGA ATATCACAGC GATAGATAAC GCGGCCAATA CGCTGGGTCT CGATAAATTA 
CAACAACTCA GCACTGTTAG TCAGGACTAT GATAGCGCCT ACGCCAATTA CCGTTTAGCC 
ATTTCTGCCA ATGTAATGGG GCAAAAAGCC TTGGCAAATA GTGCCTTAAC TTCTGCGCAA 
ACCAGCCTTG AAACCTTAAC CAGCAGCCAG GAAAATGCCG AATCACTGGC GTTATTATCA 
TCCGTTTATA GCATGCAAAT CGCTTTAGAC AATAGCAAAG GTGCAATACT GGGTATCAAA 
TCTGCCAAAG CCATTGCCAG CGCCGAACAA CTCGAGCCAC AAAATCCTCG CGTTGCATTA 
ATTAAGGCAA TTGCCGCCTA TAACACTCCC GCCATGTTTG GTGGCAGCAT GCAAAATGCT 
AAAACACTTG CCAGTACCGC TATTGAGCAC TTTGCCCAGC CCTGTGACAC TATTTGCTGG 
GGTGAGGCAG AGGCTTACAC TTGGCGTGGA CTTGCCAAGC AGGAATTGGG TGATACCCAA 
GGCGCGATGG AAGATTGGCA ACAGGCATTG AGTCTTGATA AAAATTACGG CTGGGCTAAG 
TTTTTACTTC AACAAAATCA GCAAATAAGT GCAAAATAA
 
Protein sequence
MKTLLLLSSL ALACTSVVAA SSMNITAIDN AANTLGLDKL QQLSTVSQDY DSAYANYRLA 
ISANVMGQKA LANSALTSAQ TSLETLTSSQ ENAESLALLS SVYSMQIALD NSKGAILGIK 
SAKAIASAEQ LEPQNPRVAL IKAIAAYNTP AMFGGSMQNA KTLASTAIEH FAQPCDTICW 
GEAEAYTWRG LAKQELGDTQ GAMEDWQQAL SLDKNYGWAK FLLQQNQQIS AK