Gene SO_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0204 
Symbol 
ID1168089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp212225 
End bp212884 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID637342204 
Producthypothetical protein 
Protein accessionNP_715845 
Protein GI24371803 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA CAGATGCGCA AATTCAAAAA GATGTACTGG AAGAACTTAA ATGGGAACCT 
TCAGTCCAGG CTTCAAATAT CGGTGTTGAA GTCAAAGATG GTATTGTTAC CTTGGCCGGA 
CATGTAGACA CGTATGCTGA GAAATGGCAT GCGGAGCAAG CCGCGCAGCG AGTTTGTTGC 
GTCAAAGCCC TGGCCGTCGA AATTGACGTA AAAATGAATG GTGCGATAAA ACGCACAGAT 
GCTGATATCG CCAGATCAGT GCAGAACATT CTGGAGTGGA ATGTCTTTAT TCCAAAAGAC 
TCTGTGAGGG TGATGGTAGA AAGCGGTTGG GTAACATTAT CAGGACACGT TACAGCGGAT 
TACCAACGAC GCACTGCGGC GTCTTCAATT CGCTATATGT CAGGTGTAAC TGGTGTAAGT 
AATCAAATCG TGCTTAAACC CGTGGTAACA GCAGCTGTGA TAAAAACAGA TATTGAAGCA 
ACTCTGAAGC GACGTGCAAG TGCAGAAGCT GACGCAATAC ATGTTGATAT TCATAATCAT 
GAAGTAACAC TCAGCGGTAA GGCAAACAGC TTAGCTGAGC GAGAACTTAT AAGCCGTGCA 
GTATGGGATA GTCCAGGCGT TTGGAAGGTT ACTGATAATA TTCTTGTCAA CGCCGTCTAA
 
Protein sequence
MLKTDAQIQK DVLEELKWEP SVQASNIGVE VKDGIVTLAG HVDTYAEKWH AEQAAQRVCC 
VKALAVEIDV KMNGAIKRTD ADIARSVQNI LEWNVFIPKD SVRVMVESGW VTLSGHVTAD 
YQRRTAASSI RYMSGVTGVS NQIVLKPVVT AAVIKTDIEA TLKRRASAEA DAIHVDIHNH 
EVTLSGKANS LAERELISRA VWDSPGVWKV TDNILVNAV