| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0177 |
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| Symbol | |
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| ID | 1168064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 182935 |
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| End bp | 183597 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342180 |
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| Product | HAD family hydrolase |
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| Protein accession | NP_715819 |
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| Protein GI | 24371777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGACT GGAAGACAAT TGATACAGTA CTGCTCGATA TGGACGGCAC CCTACTCGAT
TTGCACTTCG ACAACCATTT TTGGTTAAGT CTTGTACCGC AGGAACTGAG CAGGCAACGT
GGACTGAGCC AAGACCAAGC GCACAAATTA GTCGTTGAAT CCTATAGCAA AGTTGCGGGA
ACATTGAACT GGTATTGCAT CGATTATTGG CAAACTGAAT TGCAGCTCGA CATTATGGGA
TTACATCGCA CCTTAGTTGA CCGTATTCAG CTGCGCCAAG ACAGCATGCC CTTTCTTGAC
GCCCTCAAAG CGGCAGGAAA AAAACGCATC TTAGTCACCA ATGCGCACCC TAAAAGTCTT
GCCCTTAAGC TTGAACATAC AGAACTTGGG AGCGGTTTGG ATGCAATGAT TTCGAGCCAT
GAAACGGGTT ACCCGAAAGA GCATCCGCAA TTTTGGCAAA CACTGTTTAA GCAATTTGCG
TTAGTACCTG AGCATTGTCT GTTTATTGAT GATAGTGAAC CCATTTTAAA TGCAGCGCGC
TTAGCTGGCG TGGGGCATCA GCTTGGGATC AGCAATCCCG ATAGCCAAAA ACCTGCCAAA
ACCTTCAATG ATTTTCCGGC CATTAGCGAC TATCGTGTAT TGCTTAACGA TCTCACAAGT
TAA
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| Protein sequence | MFDWKTIDTV LLDMDGTLLD LHFDNHFWLS LVPQELSRQR GLSQDQAHKL VVESYSKVAG
TLNWYCIDYW QTELQLDIMG LHRTLVDRIQ LRQDSMPFLD ALKAAGKKRI LVTNAHPKSL
ALKLEHTELG SGLDAMISSH ETGYPKEHPQ FWQTLFKQFA LVPEHCLFID DSEPILNAAR
LAGVGHQLGI SNPDSQKPAK TFNDFPAISD YRVLLNDLTS
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