Gene SO_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0154 
Symbol 
ID1168045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp162366 
End bp163490 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content50% 
IMG OID637342161 
Producthypothetical protein 
Protein accessionNP_715796 
Protein GI24371754 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCT TTGCCCCTGC AAGCCCTTTC GCCGACTTTA TCTATCGCCA CTTTCGCGCG 
ATTCACGCCC TTAAACTCGG CCTCGCCCTG CTGATTGCGG TCATTATTAA TGCCATTTGG
TCACCGCCGC ATTTTATTTG GAGCATGGTG ACAATTGTGA TCATTATGAT GAGCCTGCCA
CAGGTGGGCG GGGCGATTGA AAAGTCACTG CAACGGGCGG TAGGTACCTG TTTAGGTTCA
GCTTACGGTG TGATGTTAGT GGCCACTATC GACAGCTATT GGTTGATTAT GGGCTTGTTG
ATTTTAGGGG TAACGCTGAT CTGTTTTATC TCGGCGGGAC GTTATAGCTA CGCCTATCTG
GTGGCAGGAT TCACCATTAT TATCGTTGTT GGCGATGCCA GCCATGATAC CTCTGAGGCG
CTGTGGCGCA CGGCCAATAT TTTGCTTGGC TGTGTGATCG CCATTTTGGT GTCGTTATTT
ATCTTCCCGA TTAAAGCTAA ACACGACTGG CGTAGTCAGC TCGCTAATGC CATCAATAGT
ATGGCCAAAG TGCTCACCCA GCATTTACAG GCGCCCGCCA ACCATGATTT AGATTTTCGT
GCCGATCTCG AAGCGGCCAT GAAGGCCGTA TTAACCCAGA AGAAGCTGTT TTTCTCCCTC
GAATGGGAAA GCCAAACCCT AAAAAAGCAC AAAGTGCTGC TGGCGGAATT AGTCAACAAA
CAGGTGAGAC TGATCACCCT GCTCGAACTC CTGCCCTTAA GTCGCTGGCA GGAGGCCGAC
AAAGAGGCTT ACCACCAAAT CAATAACGTC GCCGCCGAGC TCACCGCTTA TCTGCAACGC
CTTGGCGAAT TTGTTGCAGG TAAAACAGCC ACATTACCCA CACTGCCAAA CGCATTAGAG
CAAGAGTTAC AACACAGATT ACAACTTACC TTGGCAACAC CTGCGCCTGA CCACACCTCT
ACCTCTGTGG CAAACGAGGT TGCACAAGGA TTTGCCCTCA CGGGGTACGG CTGGCTTATC
TATCAACTCG CCATTGCCGT TGAAGCGCTT TATGCCGATA TCGAGATTAT CGAAGCCGCC
TATAACGGAC AAATCAAGTT ACATAAAATC GCTAACCCTG CTTAA
 
Protein sequence
MSVFAPASPF ADFIYRHFRA IHALKLGLAL LIAVIINAIW SPPHFIWSMV TIVIIMMSLP 
QVGGAIEKSL QRAVGTCLGS AYGVMLVATI DSYWLIMGLL ILGVTLICFI SAGRYSYAYL
VAGFTIIIVV GDASHDTSEA LWRTANILLG CVIAILVSLF IFPIKAKHDW RSQLANAINS
MAKVLTQHLQ APANHDLDFR ADLEAAMKAV LTQKKLFFSL EWESQTLKKH KVLLAELVNK
QVRLITLLEL LPLSRWQEAD KEAYHQINNV AAELTAYLQR LGEFVAGKTA TLPTLPNALE
QELQHRLQLT LATPAPDHTS TSVANEVAQG FALTGYGWLI YQLAIAVEAL YADIEIIEAA
YNGQIKLHKI ANPA