Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0060 |
Symbol | |
ID | 1167959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 67096 |
End bp | 68142 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637342074 |
Product | sensor histidine kinase |
Protein accession | NP_715702 |
Protein GI | 24371660 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTG CCAATACAGC TTCCATCAAC CATTACTGGC GTACGCATCC GGCGTTATTT ACCGCCATGT TGTTAGTGGT CGTACTGATA ACTAGCTATT TCATTGATGT ATTTTCAGGA TCAGCCATTG CTGTGCTGCT TATCCTGCAA TTAGCTGTGG TCGTAGTGGC CCTGCAATGC AGTGCCAACT ACGCCTACTT TGTTGCGGTG TTTGGCGCCG TCAGTTTCAA CTTTTTATTT ACCGCGCCGC GCTATTCGTT GCAGATGCTT AATGTCGAAG ACATCGTTAA TTTAACGGTG TTTTTACTGG CCGCCCTTAC CAGCAGTAAA CTGGCCAAGC ATTACCGCCG CCAGCAGGAT GCGCTTGAAC AGGCGCAGCT GAGAAACAGT ATTTTGCTCT CCGTGTCCCA CGATTTACGC ACGCCCTTAG CAACCATCAT TGGCACCTTA ACCACCTTAA AGGAATATCA GCCTAAGTTG AGCCCAGCGC AAACTGAAGA ACTCATCGAC TCAGCGGCCG CCGAGAGCCA TAGGTTGCAC CAGTATATCG AAAACCTCTT ACAAGCTAAT AAGTTACAAC ATGGCGCACT CAAATTTAGC CTAGATGAAG CCAATATCCG CGAGGTGCTA CAGCGCACCA TAGCGCGCTT TCAAACCGAG CAACCGAGGA TCCAAATCCA AAGCGAGCCA GAGCTACCGT CATTAATGAT TTGCAGTTCT TTGATTGAAC AGGCGATTTT TAATGTGCTC GATAACGCCC TGCACTACTC GCCCGCCACA CAGCCCGTCA CTGTGAGCTT ATATCGACAC CAGCATATGC TGCGCATCGA CATTCAAGAT CAGGGCAAAG GCATAGCGCC ATCCCAAACG GGGGCGATTT TCGAACTATT CTATCGCCAA CATCCCACCA CCGATGGTGG TGCAGGATTG GGCCTTCCGG TCGCTAAAGG CATTATTACC GCCCATAACG GCACGATCAG CGCCGAAAAA GTTGCCCATG GCAGCTTGAT CCGTATTGCG TTACCGATAA CCAAGGAAAG TGCATAA
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Protein sequence | MTFANTASIN HYWRTHPALF TAMLLVVVLI TSYFIDVFSG SAIAVLLILQ LAVVVVALQC SANYAYFVAV FGAVSFNFLF TAPRYSLQML NVEDIVNLTV FLLAALTSSK LAKHYRRQQD ALEQAQLRNS ILLSVSHDLR TPLATIIGTL TTLKEYQPKL SPAQTEELID SAAAESHRLH QYIENLLQAN KLQHGALKFS LDEANIREVL QRTIARFQTE QPRIQIQSEP ELPSLMICSS LIEQAIFNVL DNALHYSPAT QPVTVSLYRH QHMLRIDIQD QGKGIAPSQT GAIFELFYRQ HPTTDGGAGL GLPVAKGIIT AHNGTISAEK VAHGSLIRIA LPITKESA
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