Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA0311 |
Symbol | |
ID | 1164748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | + |
Start bp | 295772 |
End bp | 297400 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637331424 |
Product | transporter, putative |
Protein accession | NP_699506 |
Protein GI | 23500066 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.054545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCGCAAA GAGTTTCCCC CCTTGCGCCA TTTCAGAACA AGACGTTCCG CGCGCTATGG TCGGCGACGC TGGTTTCCAA TCTCGGAGGC CTGGTCCAGA CTGTCGGCGC GGGCTGGATG ATGGCCACCA TTGCGCGATC GGACGACATG GTTGCGCTCG TTCAGGCCTC CACCACGCTG CCGGTCATGA TTTTCTCAGT CGCCGCAGGC GCGCTTGCCG ATAATTTCGA CCGCCGCCGC ATCATGCTCG TTGCGCAGAT ATTGCTTCTC GGTATCTCGG TTATTCTGGC GGCCTGTGCT TATTTCAATG TGCTTACGCC GTGGATGCTC CTGAGCTTCA CTTTTCTGAT CGGGTGCGGC GGGGCGCTTC ATAATCCTTC CTGGCAGGCG TCGATGGGCG ATATCGTGCC GCGTCATGAT CTTCCCGCCG CGGTTGCGCT GAACAGTATG AGCTTCAATC TCATGCGCAG CATCGGTCCC GCTATCGGCG GCCTGATCGT GGCTGCTGCC GGGGCGGCCT TTGCCTTTAT CTTCAATGCC TTCAGCTATT GCGCGCTTAT TCTCGCATTA TGGCAATGGA AGCCGCAAAC CGCGAAATCC ACCCTCCCGC GTGAAAAATT CGGCGGGGCT ATGGTGGCTG GCCTGCGCTA TGTTTCCATG TCGCCGAACC TTCTGAAAGT CATGTTCCGT GGCTTCCTGT TCGGCCTTTC CGCCATCGTT ATTCTTGCCC TCCTGCCGCT GGTGGCGCGT GATCTTGTGA AAGGGACGGC GCTTACCTAC GGCATCATGC TCGGCTTCTT CGGCCTCGGT GCTATCGGCG GAGCGATTTT GAGCGCACGT CTGCGTGAGC TTATGGGCAA TGAATGGCTG GTGCGCGGTT CCTTCGTCGC TTTTGCGGCA AGCTGTGTCC TGCTCTCGCT TAGCCGGCAG ATGTGGCTAA GCTGCCTCTT TCTCCTGCCC GCAGGCGTCG CCTGGGTCCT GGCGCTCTCG CTGTTCAACG TAACGGTCCA GCTTTCCACG CCGCGCTGGG TGGTGGGGCG GGCGCTTGCG CTTTACCAGA CGGCGACTTT CGGCGGCATG GCGGCGGGAA GCTGGCTCTG GGGCGCGCTG GCTGACACAT TCGGCGTGCC GAACGCGCTG CTGGTCTCGG CCGCCGTTTT GCTGTTTGGC GCACTCATCG GCCTGCTTCT GCCGCAGCCG GAATTCGAGT CGCTCAATCT CGATCCGCTC AACCGTTTCA GCGAGCCGCA ATTGCGGCTC GATCTTCGTT CGCGAAGCGG CCCCATCATG ATTATGGTGG ATTACAAAAT CGCGCAGGAC GACGTGCCCG CCTTCCTCGC GGCCATGACC TTGCGGCGGC GCATCCGCAT CCGCGACGGT GCGCGGCAAT GGGCGCTGCT GCGCGATCTG GAAAATCCGG AATTGTGGAC CGAAAGCTAC CATGTACCGA CATGGGTGGA ATATGTGCGC CATAACCAGC GGCGCACACA GGCGGATGCG GAAGTTTCGG AACGCTTGCT CGCGTTGCAT TGCGGGACAA CGCCGCCGGT CGTACATCGC ATGATCGAGC GCCAGACCGT GCCGGTGCAC GACGACATGC CGCTCAAAAC CCACCTTGAT CTTACCTGA
|
Protein sequence | MPQRVSPLAP FQNKTFRALW SATLVSNLGG LVQTVGAGWM MATIARSDDM VALVQASTTL PVMIFSVAAG ALADNFDRRR IMLVAQILLL GISVILAACA YFNVLTPWML LSFTFLIGCG GALHNPSWQA SMGDIVPRHD LPAAVALNSM SFNLMRSIGP AIGGLIVAAA GAAFAFIFNA FSYCALILAL WQWKPQTAKS TLPREKFGGA MVAGLRYVSM SPNLLKVMFR GFLFGLSAIV ILALLPLVAR DLVKGTALTY GIMLGFFGLG AIGGAILSAR LRELMGNEWL VRGSFVAFAA SCVLLSLSRQ MWLSCLFLLP AGVAWVLALS LFNVTVQLST PRWVVGRALA LYQTATFGGM AAGSWLWGAL ADTFGVPNAL LVSAAVLLFG ALIGLLLPQP EFESLNLDPL NRFSEPQLRL DLRSRSGPIM IMVDYKIAQD DVPAFLAAMT LRRRIRIRDG ARQWALLRDL ENPELWTESY HVPTWVEYVR HNQRRTQADA EVSERLLALH CGTTPPVVHR MIERQTVPVH DDMPLKTHLD LT
|
| |