Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA0065 |
Symbol | |
ID | 1164502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | - |
Start bp | 62192 |
End bp | 62908 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637331190 |
Product | type IV secretion system protein VirB5 |
Protein accession | NP_699272 |
Protein GI | 23499832 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0500304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA TAATTCTCAG CTTCGCATTC GCCCTGACTG TAACCAGCAC GGCGCACGCG CAGCTCCCGG TGACAGATGC CGGCTCCATC GCGCAGAACC TGGCCAACCA TCTCGAACAG ATGGTGAAGT TCGCCCAGCA GATCGAGCAA CTGAAACAGC AGTTTGAAGA ACAGAAAATG CAGTTCGATG CCCTGACCGG CTACCGTGGC CTTGGCGATA TTCTCCGCGA CCCTACGCTG CGTAGCTATC TGCCACATAA CTGGCGAGAT CTCTACGAAG CGGTGATGAG CGGCGGCTAC CTGGCGGCGG CTGGCGAAAC GGCCAACCTC TTACGCAAAA GCCAGGTATA CGATCCGTGT GCCTCCATCT CCGACAAAGA TCAGCGCATC GCATGTGAGG CTAAAGTGGT GAAGCCGGTC CAGGACAAGG TCATGACGTC CAAAGCCTAC GACGCCACTG ACAAACGCCT ACAAGAGATC GAGAGCTTGA TGCAGGAGAT CAACAAGACG GGAGACCCGA AGGCGATTGC CGAATTGCAA GGCCGGATCG AAAGCGAAAA TGCCATGATC CAAAACGAAG ACACCCGCCT TCATCTCTAC CAGCAGATGG CAGAGGCACA GGACAAGCTC CTGGACGAAC GCCAGCACGA ATTAGACGCG AAGGATAATG CCCGGCGCGG CTATCCGCAG CCGAAAGCAC TGGAAGCCGC CTATTAA
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Protein sequence | MKKIILSFAF ALTVTSTAHA QLPVTDAGSI AQNLANHLEQ MVKFAQQIEQ LKQQFEEQKM QFDALTGYRG LGDILRDPTL RSYLPHNWRD LYEAVMSGGY LAAAGETANL LRKSQVYDPC ASISDKDQRI ACEAKVVKPV QDKVMTSKAY DATDKRLQEI ESLMQEINKT GDPKAIAELQ GRIESENAMI QNEDTRLHLY QQMAEAQDKL LDERQHELDA KDNARRGYPQ PKALEAAY
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