Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1911 |
Symbol | polC |
ID | 1014721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1890888 |
End bp | 1895294 |
Gene Length | 4407 bp |
Protein Length | 1468 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637317079 |
Product | DNA polymerase III PolC |
Protein accession | NP_688900 |
Protein GI | 22538049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAT TGTTCAAGAA ACTTATGGAT CAGATTGAAA TGCCGCTTGA AATTAAGAAT TCAAGTGTTT TTTCGTCTGC TGATATTATC GAGGTAAAGG TTCATTCTCT ATCACGCTTA TGGGAATTTC ATTTTTCATT TCCAGAATTA TTGCCAATTG AGGTGTATCG TGAATTACAA ACTCGTTTAG TGAATAGTTT TGAAAAAGCA GATATAAAGG CTACTTTTGA TATAAGAGCA GAAACTATTG ATTTTTCTGA TGATCTGCTA CAGGATTATT ATCAACAAGC TTTTTGTGAA CCCTTGTGTA ATAGTGCAAG TTTTAAGAGT TCTTTTTCAC AATTAAAAGT TCATTACAAT GGCAGTCAGA TGATTATTTC AGCACCTCAA TTTGTCAATA ATAATCATTT TCGTCAGAAT CATTTGCCGC GTTTGGAACA ACAGTTTTCA TTGTTTGGAT TTGGTAAACT TGCTATTGAT ATGGTTTCTG ATGAACAAAT GACGCAAGAC TTAAAATCAT CATTTGAAAC TAATCGCGAG CAATTGCTTG AAAAAGCTAA CCAAGAAGCT ATGCAAGCCT TGGAAGCACA AAAATCACTA GAAGATTCAG CGCCTCCATC AGAAGAAGTG ACCCCAACTC AAAATTATGA TTTCAAAGAG CGTATCAAAC AACGTCAAGC TGGCTTTGAA AAAGCAGAGA TTACACCCAT GATTGAGGTG ACAACAGAAG AAAATCGTAT CGTTTTTGAA GGAATGGTTT TTAGTGTTGA ACGAAAAACA ACCCGCACTG GACGTCATAT CATTAATTTT AAGATGACTG ATTATACCTC AAGTTTTGCT ATGCAAAAGT GGGCTAAAGA TGATGAAGAA TTGAAGAAGT ACGATATGAT TTCTAAAGGT TCGTGGTTGC GAGTCAGAGG GAATATTGAG AACAATAACT TTACTAAATC TTTGACAATG AATGTTCAAG ATATCAAAGA GATTGTGCAT CATGAACGTA AAGACTTAAT GCCAGCAGAT CAAAAACGTG TGGAATTTCA TGCTCATACC AATATGTCAA CGATGGATGC TTTACCAACT GTCGAGAGCC TCATTGATAC TGCAGCTAAG TGGGGACACC CAGCTATTGC AATTACTGAC CATGCCAATG TTCAAAGTTT TCCGCATGGC TACCACAGAG CAAAAAAAGC AGGTATAAAA GCAATTTTTG GATTAGAGGC AAATATTGTT GAAGATAAAG TGCCTATTTC CTACAACGAA GTTGATATGA ATTTGCACGA AGCAACTTAT GTTGTATTTG ATGTGGAAAC TACAGGTCTT TCTGCAGCTA ATAATGACCT AATTCAGATT GCAGCATCAA AAATGTTCAA GGGTAATATT ATTGAGCAAT TTGATGAGTT TATTGACCCA GGTCATCCTC TTTCTGCCTT TACAACTGAA TTGACAGGTA TTACGGATAA TCATGTCAGA GGTTCAAAAC CTATTTTACA AGTCCTTCAG GAATTTCAGA ATTTTTGTCA AGGTACGGTT TTAGTTGCGC ATAATGCAAC CTTTGACGTT GGTTTTATGA ATGCGAATTA TGAACGTCAT AATCTGCCTT TGATCACACA GCCGGTCATT GATACCTTAG AATTTGCAAG AAATCTTTAT CCTGAATATA AGCGTCATGG TTTGGGGCCT CTAACCAAAC GTTTCCAAGT TGCTTTGGAA CATCATCATA TGGCCAACTA CGATGCTGAA GCAACGGGTC GCTTACTCTT TATTTTCTTA AAAGAGGCGC GGGAAAATCG TGATGTGACT AATTTGATGG AGCTCAATAC TAAATTGGTA GCTGAAGACT CTTACAAAAA GGCACGCATA AAGCATGCAA CCATTTATGT CCAAAATCAG GTTGGACTTA AAAATATATT TAAGTTAGTT AGCCTTTCAA ATGTTAAATA TTTTGAAGGG GTGGCAAGAA TTCCTAGGTC AGTTTTAGAT GCTCACAGAG AAGGTCTCTT GCTAGGTACT GCCTGTTCTG ATGGAGAAGT TTTTGATGCC TTGTTATCAA ATGGAATTGA TGCAGCAGTG ACCCTAGCTA AATATTATGA TTTTATTGAA GTCATGCCAC CTGCTATTTA TCGCCCCTTG GTAGTACGTG ATTTAATTAA AGATGAGGTG GGGATTCAAC AAATTATTAG AGACCTAATA GAGGTCGGTC GGCGTTTAGA TAAGCCTGTT TTAGCTACGG GAAATGTTCA TTATATTGAG CCTGAAGATG AGATTTACCG TGAGATTATT GTTCGTAGTC TTGGACAAGG TGCCATGATT AATAGGACTA TAGGTCGTGG GGAGGATGCT CAGCCAGCGC CTTTGCCAAA AGCACATTTC CGCACAACAA ATGAGATGTT AGATGAATTT GCCTTTCTTG GTAAAGATTT AGCCTATGAG ATCGTTGTAA CCAATACGAA TACTTTTGCA GATCGATTTG AAGACGTTGA AGTTGTAAAA GGGGATCTCT ATACTCCGTT TGTTGATCGT GCTGAAGAAC GAGTTGCTGA ATTAACTTAT GCTAAAGCAT TCGAAATATA TGGTAATCCT CTTCCTGATA TTATTGATTT ACGTATCGAA AAAGAGTTAG CATCTATACT TGGTAATGGA TTTGCCGTTA TCTATCTTGC TTCGCAAATG TTGGTGCAAC GTTCTAATGA ACGTGGTTAT CTAGTAGGAT CACGTGGGTC TGTTGGGTCG AGTTTTGTAG CGACCATGAT AGGAATTACT GAAGTTAATC CAATGCCACC TCATTATGTT TGCCCAAATT GTCAGCATTC TGAATTTATC ACAGATGGTT CTTGTGGTTC AGGCTATGAT TTACCAAATA AAAATTGTCC TAAATGTGGT ACTTTGTACA AGAAAGATGG ACAGGATATT CCGTTTGAAA CTTTCTTAGG ATTTGATGGA GATAAGGTTC CTGATATTGA TCTGAATTTC TCTGGAGATG ATCAACCTTC TGCTCACTTA GACGTTCGTG ATATCTTTGG AGAAGAATAT GCTTTTCGTG CAGGAACGGT AGGTACCGTA GCTGAAAAAA CTGCCTTTGG TTTTGTCAAA GGTTACGAAC GAGATTACAA TAAATTTTAT AACGATGCAG AGGTCGAACG GTTAGCGACT GGTGCTGCGG GAGTTAAACG TTCTACAGGT CAACACCCCG GTGGTATTGT TGTTATTCCT AACTATATGG ATGTTTATGA TTTTACTCCG GTTCAATATC CAGCAGATGA TATGACAGCT GCTTGGCAGA CAACTCACTT CAATTTCCAT GATATTGATG AGAATGTCTT GAAGTTAGAT ATTCTAGGAC ATGATGATCC TACTATGATT CGTAAACTTC AGGATTTATC AGGAATTGAT CCATCAAATA TCCTTCCAGA TGATCCAGAC GTTATGAAGT TATTTTCTGG TACGGAAGTT TTAGGAGTGA CAGAAGAGCA AATTGGAACT CCTACAGGAA TGCTTGGTAT TCCAGAGTTT GGTACGAACT TTGTTCGTGG TATGGTGAAC GAAACCCATC CAACCACATT TGCAGAATTG TTGCAACTGT CAGGGCTATC ACATGGTACG GATGTTTGGT TAGGTAATGC TCAAGACTTA ATCAAGGAAG GTATTGCTAC CTTATCAACT GTTATTGGTT GTCGTGATGA CATCATGGTT TATTTAATGC ACGCTGGCCT ACAACCAAAG ATGGCCTTTA CAATCATGGA GCGCGTGCGT AAGGGGTTAT GGTTGAAAAT TTCAGAAGAT GAGCGTAATG GTTATATCCA AGCAATGCGT GATAATAATG TCCCGGATTG GTATATTGAA TCGTGTGGAA AAATCAAGTA TATGTTCCCT AAAGCCCATG CAGCAGCCTA TGTTTTAATG GCATTACGTG TGGCGTACTT TAAAGTACAT TATCCAATAT TTTATTATTG TGCTTATTTT TCTATTCGCG CCAAAGCTTT TGAATTACGC ACAATGAGTG CTGGACTTGA TGCCGTTAAG GCGCGCATGA AGGATATCAC TGAGAAGCGT CAGCGTAATG AGGCGACGAA TGTCGAAAAT GATCTTTTTA CGACATTAGA GTTGGTTAAT GAAATGCTTG AGCGTGGCTT TAAATTTGGG AAATTAGATC TTTATCGTAG CCATGCGACT GACTTTATTA TTGAAGAGGA TACGCTAATC CCTCCATTTG TTGCTATGGA AGGCTTGGGA GAAAACGTTG CAAAACAGAT AGTTCGGGCA CGTGAAGATG GTGAATTTTT ATCAAAAACA GAGCTTCGTA AACGAGGAGG AGTCTCAAGT ACCTTAGTTG AAAAATTTGA TGAGATGGGT ATTTTGGGAA ATTTACCAGA AGACAATCAG TTGAGTCTTT TTGATGATTT CTTCTAA
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Protein sequence | MSELFKKLMD QIEMPLEIKN SSVFSSADII EVKVHSLSRL WEFHFSFPEL LPIEVYRELQ TRLVNSFEKA DIKATFDIRA ETIDFSDDLL QDYYQQAFCE PLCNSASFKS SFSQLKVHYN GSQMIISAPQ FVNNNHFRQN HLPRLEQQFS LFGFGKLAID MVSDEQMTQD LKSSFETNRE QLLEKANQEA MQALEAQKSL EDSAPPSEEV TPTQNYDFKE RIKQRQAGFE KAEITPMIEV TTEENRIVFE GMVFSVERKT TRTGRHIINF KMTDYTSSFA MQKWAKDDEE LKKYDMISKG SWLRVRGNIE NNNFTKSLTM NVQDIKEIVH HERKDLMPAD QKRVEFHAHT NMSTMDALPT VESLIDTAAK WGHPAIAITD HANVQSFPHG YHRAKKAGIK AIFGLEANIV EDKVPISYNE VDMNLHEATY VVFDVETTGL SAANNDLIQI AASKMFKGNI IEQFDEFIDP GHPLSAFTTE LTGITDNHVR GSKPILQVLQ EFQNFCQGTV LVAHNATFDV GFMNANYERH NLPLITQPVI DTLEFARNLY PEYKRHGLGP LTKRFQVALE HHHMANYDAE ATGRLLFIFL KEARENRDVT NLMELNTKLV AEDSYKKARI KHATIYVQNQ VGLKNIFKLV SLSNVKYFEG VARIPRSVLD AHREGLLLGT ACSDGEVFDA LLSNGIDAAV TLAKYYDFIE VMPPAIYRPL VVRDLIKDEV GIQQIIRDLI EVGRRLDKPV LATGNVHYIE PEDEIYREII VRSLGQGAMI NRTIGRGEDA QPAPLPKAHF RTTNEMLDEF AFLGKDLAYE IVVTNTNTFA DRFEDVEVVK GDLYTPFVDR AEERVAELTY AKAFEIYGNP LPDIIDLRIE KELASILGNG FAVIYLASQM LVQRSNERGY LVGSRGSVGS SFVATMIGIT EVNPMPPHYV CPNCQHSEFI TDGSCGSGYD LPNKNCPKCG TLYKKDGQDI PFETFLGFDG DKVPDIDLNF SGDDQPSAHL DVRDIFGEEY AFRAGTVGTV AEKTAFGFVK GYERDYNKFY NDAEVERLAT GAAGVKRSTG QHPGGIVVIP NYMDVYDFTP VQYPADDMTA AWQTTHFNFH DIDENVLKLD ILGHDDPTMI RKLQDLSGID PSNILPDDPD VMKLFSGTEV LGVTEEQIGT PTGMLGIPEF GTNFVRGMVN ETHPTTFAEL LQLSGLSHGT DVWLGNAQDL IKEGIATLST VIGCRDDIMV YLMHAGLQPK MAFTIMERVR KGLWLKISED ERNGYIQAMR DNNVPDWYIE SCGKIKYMFP KAHAAAYVLM ALRVAYFKVH YPIFYYCAYF SIRAKAFELR TMSAGLDAVK ARMKDITEKR QRNEATNVEN DLFTTLELVN EMLERGFKFG KLDLYRSHAT DFIIEEDTLI PPFVAMEGLG ENVAKQIVRA REDGEFLSKT ELRKRGGVSS TLVEKFDEMG ILGNLPEDNQ LSLFDDFF
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