Gene SAG1378 details

Gene Information

• Locus tag: SAG1378
• Symbol: aroB
• ID: 1014187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1387363
• End bp: 1388430
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637316554
• Product: 3-dehydroquinate synthase
• Protein accession: NP_688376
• Protein GI: 22537525
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.835193
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGTTG AAGTTGACTT ACCGAATCAC CCTTATCATA TTAAAATTGA AGAAGGATGT 
TTTTCTGAGG CTGGTGACTG GGTATCACAT TTATGGCAGA AACAAATGAT AACTATTATC 
ACAGATAGTA ACGTAGAAAT ATTATACGGG GAGTCGCTTG TCAACCAGTT AAAAAAACAA 
GGTTTTACAG TACATGTTTT TAGTTTTGCT GCGGGTGAAG CTAGTAAAAC TTTGGAAGTT 
GCTAATCGTA TTTATGCTTT TTTAGCAAAG CATCATATGA CCAGAAGCGA TGGGATCATT 
GCACTTGGTG GAGGCGTCGT CGGAGATTTA GCAGCGTTTG TTGCTTCTAC TTATATGCGG 
GGAATCCATT TTCTTCAAAT TCCAACTAGT TTAACAGCAC AGGTTGATTC TTCCATTGGC 
GGAAAAACAG GAGTCAACAC TTCATTCGCT AAAAATATGG TAGGTACTTT TGCACAACCT 
GATGGTGTAC TGATAGATCC TGTTACTCTA AAAACATTGG GCAATCGTGA ATTAGTTGAA 
GGTATGGGAG AAGTCATCAA ATATGGCTTG ATTGATGATA TAAAACTCTG GCATATTTTA 
GAAGAGATGG ATGGGACTAT TGATAGTATC CTTGATAATG CATTAGCTAT TATTTATCAC 
TCTTGTCAAG TTAAACGAAA GCATGTTTTA GCTGATCAAT ATGATAAAGG GTTAAGGATG 
CATTTGAATT TTGGCCACAC TATCGGTCAT GCTATCGAAG TACATGCTGG CTATGGAGAA 
ATAATGCATG GAGAAGCTGT TGCAATTGGA ATGATCCAGC TTTCTCGTGT GGCTGAGCGT 
AAAAATCTTA TGCCAAGAGG TATCAGTCAA GATATTTATA ATATGTGTTT AAAATTTGGC 
CTTCCGGTCC ACTATGCGGA ATGGGATAAG GACGTCTTAT TTGACATATT GAGTCATGAT 
AAAAAAGCAA GTGGACAATT TATTAAAATT GTTATACTGC CTCAATTAGG TAGTGCAACA 
GTCCACCAAA TACCTTTAGA AGAAATGAGA GATTATTTGG AGAAATAG 

 

Protein sequence

MQVEVDLPNH PYHIKIEEGC FSEAGDWVSH LWQKQMITII TDSNVEILYG ESLVNQLKKQ 
GFTVHVFSFA AGEASKTLEV ANRIYAFLAK HHMTRSDGII ALGGGVVGDL AAFVASTYMR 
GIHFLQIPTS LTAQVDSSIG GKTGVNTSFA KNMVGTFAQP DGVLIDPVTL KTLGNRELVE 
GMGEVIKYGL IDDIKLWHIL EEMDGTIDSI LDNALAIIYH SCQVKRKHVL ADQYDKGLRM 
HLNFGHTIGH AIEVHAGYGE IMHGEAVAIG MIQLSRVAER KNLMPRGISQ DIYNMCLKFG 
LPVHYAEWDK DVLFDILSHD KKASGQFIKI VILPQLGSAT VHQIPLEEMR DYLEK