| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1176 |
|---|
| Symbol | |
|---|
| ID | 1013983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 1179904 |
|---|
| End bp | 1180776 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637316361 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_688185 |
|---|
| Protein GI | 22537334 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG CCGCTAAACA ACTCTACATT ACCCAACCTT CACTTTCAAA CGCTGTTAGG
AACCTTGAGA CTGAGATGGG TATCCAAATT TTTATTCGAA ATCCAAAAGG AATAACGTTA
ACAAAAGATG GTATGGAATT TCTGTCATAT GCGCGACAAA TTCTAGAACA AACAGCACTT
CTTGAAGAGC GTTATAAGGG TGATAATACA AGTCGTGAGC TGTTCAGCGT TTCTTCACAA
CACTATGCAT TTGTGGTTAA CGCTTTTGTA GCTCTCTTTA ATGGCACAGA CATGACCCAA
TACGAACTTT TTTTACGTGA AACTAGGACT TGGGAAATTA TTGATGATGT TAAAAATTTC
CGTTCAGAGA TTGGTGTTCT GTTTCTTAAT AGCTATAATA GAGATGTATT AACCAAATTA
TTCGACGATA ATTCCTTAAT TGCCACAACT CTTTTTACTA CTACACCTCA TATTTTCGTG
AGCAAATCCA ATCCCTTAGC TAATAGAAAA AAATTAAATA TGAAAGATTT AGAAGATTAT
CCTTATCTGA GTTATGATCA AGGCCTGCAT AATTCTTTCT ACTTTTCTGA GGAAATGATG
TCTCAAATTC CTCACCCAAA ATCCATTGTT GTCAGTGATA GAGCAACTCT GTTTAATTTA
ATGATTGGAT TAGATGGTTA TACAGTGGCA ACTGGTATCC TCAACTCAAA ATTGAACGGT
GACGAAATTG TCGCAATCCC TCTTGACGTG GATGATGTTA TTGATATTGT CTATATCCGA
CACGACAAAG CAAACCTTTC AAAAATGGGA CAAAAATTTA TTGACTATTT ATTAGAGGAA
GTTTCGTTTA ATCATAAAAA TAAACAGTCC TGA
|
|---|
| Protein sequence | MNEAAKQLYI TQPSLSNAVR NLETEMGIQI FIRNPKGITL TKDGMEFLSY ARQILEQTAL
LEERYKGDNT SRELFSVSSQ HYAFVVNAFV ALFNGTDMTQ YELFLRETRT WEIIDDVKNF
RSEIGVLFLN SYNRDVLTKL FDDNSLIATT LFTTTPHIFV SKSNPLANRK KLNMKDLEDY
PYLSYDQGLH NSFYFSEEMM SQIPHPKSIV VSDRATLFNL MIGLDGYTVA TGILNSKLNG
DEIVAIPLDV DDVIDIVYIR HDKANLSKMG QKFIDYLLEE VSFNHKNKQS
|
|---|
| |