Gene SAG0787 details

Gene Information

• Locus tag: SAG0787
• Symbol: holA
• ID: 1013591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 785353
• End bp: 786390
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637315975
• Product: DNA polymerase III subunit delta
• Protein accession: NP_687802
• Protein GI: 22536951
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.186067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCGA TTGAAGAAAT TGGGAGAATT ACCCCAGATA ATTTAGGGTT AGTAACTGTT 
TTAGCAGGAG AAGATTTAGG GCAATATGCT CAGATGAAAG AGAAGCTATT TCAGGTAATT 
GGATTCAATA AAGACGATTT AGCCTATTCT TATTTTGATT TAAGTGAAGA AGACTATCAA 
AATGCGGAAT TAGACTTAGA AAGTTTACCT TTTTTATCAG ACTACAAGGT TGTTATTTTT 
GATCAGTTTC AAGATATTAC AACTGATAAA AAAACTTATT TAGATGAACA AGCAATGAAG 
CGCTTTGAAG CCTACTTGCA GAATCCTGTA GATACTACGA GACTTGTTAT TTGTGCTCCA 
GGAAAACTTG ATGGAAAACG TCGACTTGTA AAGTTATTGA AACGTGATGC TCGTGTTTTA 
GAGGCTAATA CTTTAAAAGA ATCAGATTTA AAGACGTATT TTCAAAAATA TGCTCACCAA 
GAAGGATTAG TTTTTGAAGC AGGTGTTTTT GATGAGTTAT TGATTAAGTC TAACTATGAT 
TTTAGTGATA CTTTAACGAA TATCGCTTTC TTAAAGTCAT ATAAAACAGA CGGTCATATT 
TCGTCCAATG ATGTTAGAGA GGCTATCCCT AAAAGCCTGC AAGATAATAT ATTTGATTTG 
ACTCAAGATG TCTTACTTGG CAGGATAGAT TTAGCGCGTG ATTTAGTAAG AGATTTACGT 
CTACAAGGCG AAGACGAAAT CAAATTGATT GCAATCATGT TAGGACAGTT TCGGATGTTT 
TTGCAAGTTA AAATATTGGC TAGTAAAGGG AAGTCAGAGA GTCAAATTGT TTCTGAACTA 
TCCCATTACA TAGGACGTAA AATCAACCCT TATCAAGTAA AATTTGCTGT CAGAGATTCT 
AGAAACCTTC CCCTTGCTTT TTTAAAAGAA GCGATTAGGA TTTTAATCGA GACTGACTAT 
GCTATTAAAA GAGGGACTTA TGATAAGGAT TATCTCTTTG ATTTAGCCTT ATTAAAAATT 
GCTCATAAAA AGCCCTAA 

 

Protein sequence

MIAIEEIGRI TPDNLGLVTV LAGEDLGQYA QMKEKLFQVI GFNKDDLAYS YFDLSEEDYQ 
NAELDLESLP FLSDYKVVIF DQFQDITTDK KTYLDEQAMK RFEAYLQNPV DTTRLVICAP 
GKLDGKRRLV KLLKRDARVL EANTLKESDL KTYFQKYAHQ EGLVFEAGVF DELLIKSNYD 
FSDTLTNIAF LKSYKTDGHI SSNDVREAIP KSLQDNIFDL TQDVLLGRID LARDLVRDLR 
LQGEDEIKLI AIMLGQFRMF LQVKILASKG KSESQIVSEL SHYIGRKINP YQVKFAVRDS 
RNLPLAFLKE AIRILIETDY AIKRGTYDKD YLFDLALLKI AHKKP