Gene SAG0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0404 
Symbol 
ID1013199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand+ 
Start bp411327 
End bp412004 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content33% 
IMG OID637315602 
Productrhomboid family protein 
Protein accessionNP_687438 
Protein GI22536587 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.613435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATGA AGAAGTTCGC TAAAGAGTAT CCGACGACAG TACTCTTGGT CAGTCTGACA 
ACCCTTGTTT TTTTATTGAT GCAACTAACT TATGGAAGTC AAGCGGAGTC TAGCCAAGTT 
ATTTTTCAAT TTGGTGGAAT ACAAGGTGAT TATCTAAAAG CATATCCAAC AAATCTATGG 
AGACTAATAA GTCCTATCTT TGTTCATATT GGTTGGGAAC ATTTTTTATT AAATGGTTTA 
GCTCTGTATT TCGTAGGACA AATGGGGGAA AGTATTTGGG GAAGTTTGAG ATTTCTAATT 
CTCTATATTT TATCTGGCTT AATGGGTAAT ATTTTTACGC TATTTTTTAC TCCACATGTG 
GTGGCAGCAG GAGCCTCAAC GTCTTTATTT GGTGTTTTTT CTGCTATAGC AATCGCAGGG 
TATTTTGGAA AAAATCCTTA TTTAAAACAA GTTGGAAAAT CATATCAAGT GATGATCTTG 
TTAAATTTAT TTTTTAATAT CTTCACACCC GGAGTGAGTT TAGCAGGTCA TGTTGGTGGT 
TTAGTTGGTG GAGTATTGGT GGCTATTTTT TTGACAAAAC AAAATGGTTC TTTATTATTT 
AAAACTTGGC AAAGTATTTT AGCTTTAATG ATATTTATTA TTGTATCGAT CAGCTTAATA 
GGTCTATCGT TGGTATAA
 
Protein sequence
MSMKKFAKEY PTTVLLVSLT TLVFLLMQLT YGSQAESSQV IFQFGGIQGD YLKAYPTNLW 
RLISPIFVHI GWEHFLLNGL ALYFVGQMGE SIWGSLRFLI LYILSGLMGN IFTLFFTPHV 
VAAGASTSLF GVFSAIAIAG YFGKNPYLKQ VGKSYQVMIL LNLFFNIFTP GVSLAGHVGG 
LVGGVLVAIF LTKQNGSLLF KTWQSILALM IFIIVSISLI GLSLV