Gene SAG0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0336 
Symbol 
ID1013125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp345667 
End bp346956 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content35% 
IMG OID637315528 
Producthelicase, putative 
Protein accessionNP_687370 
Protein GI22536519 
COG category[L] Replication, recombination and repair 
COG ID[COG4098] Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT ATTTAGGTAG GCTTTGGACA AAAGCACAAT TATCTGAGCA ACTTAGAAAA 
ATTGCAATTA GCTTGCCATC TTTTATAAAG AAAGGAAGCG ACTATATTTG TACCCGATGC
TCTAGTTCTG TTGCTAAAAA TTGCCAATTA CCAACTGGAA ATTATTATTG TAGAGAATGT
ATAGTTTTTG GAAGAGTTAC TAGTAATGAA AATTTATATT ATTTCCCACA AAAAACATTT
TCTAAAACGA ATTCTTTAAA ATGGAAAGGG GAACTGACAC CTTATCAAAA TGAGGTTTCA
GAAGAGTTGT TGAAAGGTAT TTCAAGTAAG GAAAATCTTC TTGTTCATGC TGTGACAGGG
GCTGGTAAAA CAGAAATGAT ATACCACTCT GTCGCCAAAG TAATTGATAC TGGAGGAAGC
GTTTGTATTG CCAGTCCTAG AATTGATGTT TGTTTAGAAT TGTATAAGCG ACTTTCAAAC
GATTTTAGAT GTGCCATAAC ATTAATGCAT GGAGAATCTC CTTCTTATCA GAGATCCCCT
TTAACTATTG CCACAACACA TCAATTGTTA AAATTTTATC ATGCTTTTGA TTTGCTAATT
GTTGATGAAG TTGATGCTTT TCCGTATGTC GACAACCCGA TACTATACCA GGGTGTAAAA
CAGGCCTTAA AGGAAAACGG AACAAGTATT TTTCTGACTG CAACTTCAAC GACTGAGTTA
GAAAGAAAAG TTGCAAGAAA AGAACTAAAA AAATTGCATC TAGCTAGGAG ATTTCATGCC
AATCCGTTAG TGATACCCGA GATGGTTTGG GTAAGTGGTA TCCAGAAAAG CTTGCAGACA
CAAAAACTAC CTCCCAAATT ATATCAGTTG ATAAATAAAC AGCGACAAAC GAGATATCCT
TTGTTATTAT TTTTCCCCCA TATTTCAGAA GGTCAGGTAT TCACCGAAAT TTTAAGACAA
GCCTTTCCTA TGGAAAAAAT TGGTTTTGTT TCAAGTAAGA GCACATCTAG GTTAAAGTTA
GTGCAAGATT TTCGAGATAA CAAATTGTCT ATCCTAGTGT CAACTACCAT TCTAGAGAGA
GGAGTAACTT TCCCTAGCGT CGACGTTTTT GTTATACAAG CAAATCATCA TTTGTTTACG
AAAAGTTCCT TGGTACAAAT TTCAGGAAGA GTTGGAAGAG CATTAGAAAG GCCCGAAGGG
CTCCTTTACT TCCTTCATGA TGGGAAAAGT AAATCGATGC ACCAAGCTAT AAAGGAGATT
AAAAACATGA ATCATATAGG AGGATTTTAA
 
Protein sequence
MENYLGRLWT KAQLSEQLRK IAISLPSFIK KGSDYICTRC SSSVAKNCQL PTGNYYCREC 
IVFGRVTSNE NLYYFPQKTF SKTNSLKWKG ELTPYQNEVS EELLKGISSK ENLLVHAVTG
AGKTEMIYHS VAKVIDTGGS VCIASPRIDV CLELYKRLSN DFRCAITLMH GESPSYQRSP
LTIATTHQLL KFYHAFDLLI VDEVDAFPYV DNPILYQGVK QALKENGTSI FLTATSTTEL
ERKVARKELK KLHLARRFHA NPLVIPEMVW VSGIQKSLQT QKLPPKLYQL INKQRQTRYP
LLLFFPHISE GQVFTEILRQ AFPMEKIGFV SSKSTSRLKL VQDFRDNKLS ILVSTTILER
GVTFPSVDVF VIQANHHLFT KSSLVQISGR VGRALERPEG LLYFLHDGKS KSMHQAIKEI
KNMNHIGGF