Gene SAG0278 details

Gene Information

• Locus tag: SAG0278
• Symbol: tkt
• ID: 1013067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 285165
• End bp: 287150
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637315471
• Product: transketolase
• Protein accession: NP_687313
• Protein GI: 22536462
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTTG ACACCATTGA TCAATTAGCG GTTAATACAG TCCGCACGCT TTCTATTGAT 
GCTATCCAAG CAGCAAATTC TGGGCACCCA GGTCTTCCTA TGGGAGCTGC GCCTATGGCT 
TATGTGCTTT GGAATAAATT CTTAAATGTA AACCCAAAAA CAAGTCGCAA TTGGACAAAC 
CGTGACCGTT TTGTGCTATC AGCTGGGCAT GGTTCAGCTC TTCTTTATAG CCTACTTCAT 
TTAGCTGGCT ATGATTTATC AATTGATGAT TTAAAACAAT TTCGCCAATG GGGATCAAAA 
ACACCTGGAC ATCCAGAAGT TAACCATACT GATGGTGTAG AAGCAACAAC TGGACCTTTA 
GGGCAAGGTA TTGCTAATGC TGTTGGTATG GCAATGGCTG AAGCTCATTT GGCTGCTAAA 
TTTAATAAAC CAGGCTTTGA TTTAGTTGAT CATTACACTT ATACACTTCA TGGTGATGGT 
TGTTTGATGG AGGGTGTTAG CCAAGAAGCT GCCAGTCTTG CTGGACACTT AAAACTTGGT 
AAATTGGTCC TTCTTTATGA TTCAAATGAT ATCTCACTTG ATGGTCCAAC ATCTCAATCA 
TTTACAGAAG ATGTTAAAGG ACGTTTTGAA TCATATGGTT GGCAACATAT CTTAGTTAAA 
GATGGTAATG ATTTAGAAGC GATTGCTGCA GCAATTGAAG CTGCTAAAGC TGAAACTGAT 
AAACCAACCA TTATTGAAGT TAAAACTATT ATTGGATTTG GCGCAGAGAA ACAGGGAACA 
TCTTCAGTTC ATGGAGCGCC ACTTGGTGCA GAAGGTATTA CTTTTGCCAA GAAGGCTTAT 
GTATGGGAAT ATCCAGACTT TACTGTTCCT GCTGAAGTTG CAGATCGATT TGCCTCAGAT 
CTTCAAGCGC GTGGTGCGAA GGCAGAAGAG GCATGGAATG ATCTTTTTGC TAAATATGAA 
GTTGAGTATC CAGAATTAGC AACTGAATAC AAAGAAGCTT TTGCTGGCCA AGCTGAGACA 
GTTGAACTGA AAGCTCATGA CCTAGGTTCA TCAGTGGCTA GTCGTGTTTC AAGCCAACAA 
GCTATTCAAC AATTATCGAC TCAATTACCG AACCTCTGGG GAGGGTCAGC AGACCTCTCA 
GCTTCTAATA ACACAATGGT AGCAGCAGAA ACAGATTTCC AAGCAAGTAA CTACGCTGGG 
CGTAATATTT GGTTTGGTGT ACGTGAATTT GCAATGGCTG CTGCAATGAA TGGAATTGCG 
CTTCACGGTG GGACTCGTGT TTATGGGGGT ACGTTCTTTG TCTTCTCAAA CTACTTGTTA 
CCAGCAGTAC GTATGGCTGC ACTTCAAAAC TTGCCAACTG TCTATGTTAT GACACATGAT 
TCTATTGCTG TTGGAGAAGA TGGGCCAACT CATGAGCCAA TAGAACAATT AGCATCAGTG 
CGCTCAATGC CTAATTTGAA CGTTATCCGT CCCGCAGACG GTAATGAAAC AAACGCTGCA 
TGGCAACGAG CTGTATCAGA GACAGATCGA CCAACGATGC TTGTTTTAAC ACGTCAAAAC 
TTACCAGTTC TTGAAGGAAC ATCAGAATTA GCCCAAGAAG GGGTTAATAA AGGTGCTTAT 
ATTTTATCAG AAGCTAAAGG TGAACTTGAT GGTATCATCA TTGCAACAGG TTCAGAAGTT 
AAATTAGCTT TAGATACTCA AGACAAACTT GAGTCAGAGG GCATCCATGT TCGCGTCGTA 
TCTATGCCAG CACAAAACAT TTTTGATGAA CAAGAGGCTT CATATCAAGA GCAAGTGCTT 
CCATCAGCTG TTACAAAACG TCTTGCTATT GAGGCAGGAT CAAGCTTCGG TTGGGGTAAA 
TATGTTGGTT TAAATGGGCT AACACTTACT ATTGATACTT GGGGAGCATC AGCACCAGGT 
AACAGAATTT TCGAAGAGTA TGGCTTTACA GTTGAGAATG CTGTATCGCT ATATAAAGAA 
CTTTAA 

 

Protein sequence

MTFDTIDQLA VNTVRTLSID AIQAANSGHP GLPMGAAPMA YVLWNKFLNV NPKTSRNWTN 
RDRFVLSAGH GSALLYSLLH LAGYDLSIDD LKQFRQWGSK TPGHPEVNHT DGVEATTGPL 
GQGIANAVGM AMAEAHLAAK FNKPGFDLVD HYTYTLHGDG CLMEGVSQEA ASLAGHLKLG 
KLVLLYDSND ISLDGPTSQS FTEDVKGRFE SYGWQHILVK DGNDLEAIAA AIEAAKAETD 
KPTIIEVKTI IGFGAEKQGT SSVHGAPLGA EGITFAKKAY VWEYPDFTVP AEVADRFASD 
LQARGAKAEE AWNDLFAKYE VEYPELATEY KEAFAGQAET VELKAHDLGS SVASRVSSQQ 
AIQQLSTQLP NLWGGSADLS ASNNTMVAAE TDFQASNYAG RNIWFGVREF AMAAAMNGIA 
LHGGTRVYGG TFFVFSNYLL PAVRMAALQN LPTVYVMTHD SIAVGEDGPT HEPIEQLASV 
RSMPNLNVIR PADGNETNAA WQRAVSETDR PTMLVLTRQN LPVLEGTSEL AQEGVNKGAY 
ILSEAKGELD GIIIATGSEV KLALDTQDKL ESEGIHVRVV SMPAQNIFDE QEASYQEQVL 
PSAVTKRLAI EAGSSFGWGK YVGLNGLTLT IDTWGASAPG NRIFEEYGFT VENAVSLYKE 
L