Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0217 |
Symbol | |
ID | 1012991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 231796 |
End bp | 232950 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637315395 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_687252 |
Protein GI | 22536401 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.35128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC ACAAATACCC AAGCAAAAAA GCCAAAAATG GCTATTTGTA TTTTGTCAAA ATCTATATGG TCAAAGACAG TCAACGTGCA GACCATATCA AACGTGGCTT TCGTACTCGA AAGGAAGCCA AAGACTACGA AGCCAGACTC ATTTATCTTA AGGCTTCAGG AAAGTTGGAA GAGTTCATCA AACCAACTCA TAAAACTTAT AACGAGATAT TCGAGAAATG GTATCAAGCC TATCAAGATA TGGTAGAGCC AACAACTGCT TCACGTACTC TTGATATGTT TCGACTTCAC ATTCTGCCAG TTATGGGAGA CTTACCCATC AGCAAAATCT CCCCTTTAGA CTGCCAGAAC TTCATCACAG ATAAAGCAAA GACCTTTAAG AATATCAAGC AAATCAAGTC CTATACTGGG AAGGTCTTTG ATTTTGCTAT CAAGATGAAA CTGCTTAAGC ATAACCCTAT GGCAGAAATC ATTATGCCAA AACGGAAAAA GACACGGATA GAAAACTATT GGACGGTTCA AGAACTTCAG GAGTTCCTAG CCATTGTCCT TCAGGAAGAG CCTTACAAAC ACTATGCACT ATTTAGATTA CTAGCTTACA GTGGCTTAAG GAAAGGCGAG CTATACGCTC TTAAGTGGGC AGATATAGAC TTTCAAACTG AGACACTAAG TGTCGATAAG AGCTTAGGAC GATTAGACGG ACAGGCAATC GAAAAAGGCA CTAAAAATGA TTTCTCAGTA AGAAAGATTA AGCTAGATAG CGAAACTATT TCTATTCTGC AAGAATGGAA ATCCATCAGC CAAAAAGAAA AGGCACAACT AGCAGTTGCA CCTCTTTCTA TCGAGCAAGA TTTTCTCTTC ACTTATTGTA CACGGTCAGG CTCTATTGAG CCACTACATG CAGACTATAT CAACAACGTC CTATCACGGA TTATCAGAAA ACACGGGTTA AAGAAAATCA GTCCTCATGG TTTTAGACAT ACTCATGCTA CCTTGATGAT TGAGATTGGA GTTGACCCAG TCAACACAGC AAAAAGACTG GGGCATGCAA GTAGTCAAAT GACCTTAGAT ACTTACAGTC ATTCGACAAC TACTGGAGAA GATAGGTCAG TCAAACAATT TGCGGACTAT CTAAAAGCAA AATAA
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Protein sequence | MSIHKYPSKK AKNGYLYFVK IYMVKDSQRA DHIKRGFRTR KEAKDYEARL IYLKASGKLE EFIKPTHKTY NEIFEKWYQA YQDMVEPTTA SRTLDMFRLH ILPVMGDLPI SKISPLDCQN FITDKAKTFK NIKQIKSYTG KVFDFAIKMK LLKHNPMAEI IMPKRKKTRI ENYWTVQELQ EFLAIVLQEE PYKHYALFRL LAYSGLRKGE LYALKWADID FQTETLSVDK SLGRLDGQAI EKGTKNDFSV RKIKLDSETI SILQEWKSIS QKEKAQLAVA PLSIEQDFLF TYCTRSGSIE PLHADYINNV LSRIIRKHGL KKISPHGFRH THATLMIEIG VDPVNTAKRL GHASSQMTLD TYSHSTTTGE DRSVKQFADY LKAK
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