Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1728 |
Symbol | |
ID | 3232355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1627804 |
End bp | 1628979 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637293074 |
Product | transporter, putative |
Protein accession | YP_179703 |
Protein GI | 57238572 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.292388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TAAATAAAGC TTCAAGTACT CAAATTATTC TAGTATTTTG TTTAGGGGTA TTTGGGATTT TGAGCACAGA ACTAGGGATG ATGGGTATAA TTCCTATTGT TTCTCAAAAT TTCAGTGTAA GTATTTCAGA TGCGGGTTGG TGTGCGAGTA TTTTTGCACT CGTGATAACT TTTTGCGCCC CTATTGTCCC CCTGCTTTGT GCAAATTTCA ATCCTAAAAA ACTTATGCTT ATTTGTTTAG CTGTGTTTAT CTTAAGCTCG TTAACTTCTG CTTTTGTGAG TGAATTTTGG CAATTGCTTA TTTTAAGAGC TATTCCTGCT TTTTTTCATC CTATTTATAT AGCTCTTGCT CTAAGTATGG TTGCAAATTT GGTCGAAGAT AAGAAAGAAA TTCCAAAAGC TACAGCTAAG ATTTTTGCAG CAGTTAGTGC TGGAATGGTT TTGGGTGTAC CTATGACTAG TTATTTTGGT GGAAATTTTA GTTTTAAAAT GGCAATGTTA TTTTTTGTAT TTTTAAATAC CTTATCTTTT ATAGCAACTT TATTTTTTGT TCCTGATTTT AAAAAAGTAA ATTCTGTAAA AATAAGCAAA CAATTGCTTA TTTTAAGATA CCCACTTTTA TGGATTAGCA TACTTTGTGT TATTTGTATA AATGCTGGAA TTTGGGGTTT TTACTCTTAT TTTTCTGATT TCTTACATAG TGTAGGAAAG ATGAATTTTA CTTTAATTAG TATTGTATTG GCTATTTATG GTTTTTCAAA TATTATAGGC AATTATATAG CCGGAAAGAC CCTTGTTAAA AACGCAAATT TTACTTTGAT TTTAACACCT TTAATTATGA TAGGATTTTA TATTTTACTT TTTAGTTTTT ATAGTGAAAT TATACTTATA ATATTTGCCT TTATATTAGG AATTTTAGCA GGTGTGATGA ATAACGGCAC GCATTTTATG ATAAGTTATC CCTTTCCAAA GGCTGCTAAT TTTAGCAATG GACTTTTTAT AAGCGTGGCC AATATAGGAT TAAGCACCGG AACTGCTATT TGTGGACTTG TGATTTCTTT GAGCGATACG CGTTATATTA TCGTAAATAC TATTGTTTTG TTGATTTTAG GAATTATCAT GATTTTTGTA AGAAGTAGGA TAGAAAAAAT GAAATTAAGA TTTTAA
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Protein sequence | MKNLNKASST QIILVFCLGV FGILSTELGM MGIIPIVSQN FSVSISDAGW CASIFALVIT FCAPIVPLLC ANFNPKKLML ICLAVFILSS LTSAFVSEFW QLLILRAIPA FFHPIYIALA LSMVANLVED KKEIPKATAK IFAAVSAGMV LGVPMTSYFG GNFSFKMAML FFVFLNTLSF IATLFFVPDF KKVNSVKISK QLLILRYPLL WISILCVICI NAGIWGFYSY FSDFLHSVGK MNFTLISIVL AIYGFSNIIG NYIAGKTLVK NANFTLILTP LIMIGFYILL FSFYSEIILI IFAFILGILA GVMNNGTHFM ISYPFPKAAN FSNGLFISVA NIGLSTGTAI CGLVISLSDT RYIIVNTIVL LILGIIMIFV RSRIEKMKLR F
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