Gene CJE1223 details

Gene Information

• Locus tag: CJE1223
• Symbol: hemD
• ID: 3231730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 1138494
• End bp: 1139123
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 637292577
• Product: uroporphyrinogen-III synthase
• Protein accession: YP_179211
• Protein GI: 57237962
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1587] Uroporphyrinogen-III synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.732844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTT ATCTCTTAAA TGAAACTCCT TTTGAAGGGG TGGAAAATCT TATTTTAAAT 
GAGATTGTTT TTTATGATTT TAGTGTGGAT TTGAGTTTGT ATGATGCTTT AATCTGCACT 
TCAAAAAATG CTTTAAAAGC TTTACAACAT GCAAAAATCA CTTTAAATTT CAAACTCAAT 
TTATACGCTG TGGGACAAAG TACAGCTCAA TACGCTAAAA ATTTAGGTTT TAAAAAGATT 
AAAATTCCAT CAAAGGCTTA TGGAAAAGAT CTTTTTCTTG AATTTAAAGA GGAGTTAAAA 
ATGCAAAAAT GTTTGTATTT AAGGGCTAAA AATATTGTTT CAACTTTAAA TTTGGATCTT 
AAAAATGTAG GTGTGGATTT AGATGAAATG ATTGTTTATG AAAATGTTTT TAAAAAAGGC 
GACAAAAAGC TTATCTATCC TGCTATTTTT ATATTCACCT CTCCTTTAAG TGTAGAAAAT 
TTTTTAAAAT TTTATAGCTT AAAAGAAGAA GATAAGGTTG TAGTTATAGG GCAAAGCACA 
GCAAAGAAGC TTTTAAATTT TAAAAATCTT TATATATGCG AAAATCAAAG TCTTTTAGAC 
TGTGTTAAGC TCGCTAAGAC TTTGGTTTAA 

 

Protein sequence

MKIYLLNETP FEGVENLILN EIVFYDFSVD LSLYDALICT SKNALKALQH AKITLNFKLN 
LYAVGQSTAQ YAKNLGFKKI KIPSKAYGKD LFLEFKEELK MQKCLYLRAK NIVSTLNLDL 
KNVGVDLDEM IVYENVFKKG DKKLIYPAIF IFTSPLSVEN FLKFYSLKEE DKVVVIGQST 
AKKLLNFKNL YICENQSLLD CVKLAKTLV