Gene CJE1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE1192 
SymboldapE 
ID3231701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand- 
Start bp1108813 
End bp1109910 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content36% 
IMG OID637292548 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_179182 
Protein GI57237934 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.467708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAA AAGAATTTTT AATCGAACTT TTAAAATTTA AATCTGTTAC GCCAAATGAT 
GATGGAGCTT TAAATTTCAT CGCTATGGAA CTGAGTGATT TTGAAGCTTT TTTTATAGAA 
AAAGAAGGCA TTAAAAACCT TTTACTCACT AAAAAATTTA AAGATGAAGG CGAGCATTTA 
GCTTTTGGTG GGCATGTAGA TGTGGTGCCT GCAGGTGAGG GTTGGAGTAG CGATGCTTTT 
GTGCCTATGG AAAAAGAAGG CTTTATCTAT GCAAGGGGTG CTCAAGATAT GAAAAGCGGA 
GTAGCAGCCT TTGTAGATGC GGTAAAGAAT GCGGATTTTA AAGGAGCTAG ACTTAGCCTT 
ATTTTAACAA GTGATGAAGA AGGCGAAGCT ATATATGGAA CTAAGGCTGT TTTAGAATGG 
ATGCAAGAAA GAGATATGCT ACCTGATTAT GCTGTGGTTG CCGAGCCAAC CTGCGTTAAA 
AAAATCGGCG ATAGTATTAA AATAGGGCGT CGTGGTTCTA TCAATGGAAA ACTTTTAATC 
CGTGGAAAAC AAGGGCATGC GGCTTACCCT GAAAAATGTA TCAATCCTGT GCATGATTTT 
GCGCCAGTTT TAAAGCTTTT AGCGGGTTTT GATCTTGATC CTGGAAGTGC TGAATTTAGT 
CCTTCAAAAA TCGTTATAAC TGATATTCGC GGAGGTATGG GGGTGTGTAA TGTTACGCCA 
AATGATTTAA AACTTATGTT TAATGTTCGC AATTCCCCTG ATACAAGCTT AGAAGATGTA 
AAAAGTTATG TAGAAAAAAT TTGTCATGGT TTAAACTATG AGTTAGAGCT AAAACAATCA 
AGCGAAGCTT TTTTGACAAA TATCGATAAT AAAATCGTTC AAAAAATGAA TGAAAGCGTT 
CAAAAAATCA CCCATGAAGT GCCAGAGCTT AATACTAAAG GCGGCACAAG TGATGCAAGG 
TATTTTGCAA AATACGGTGT AAAGGTAGTG GAATTTGGGG TTTGTAATGA TAGAATTCAC 
GCTATTGATG AAAGAGTAAG TATAGAAGAA TTTGAAAAAC TTTGCCTTGT TTTTAAAGAC 
TTGATAGAAA ATTTTTAA
 
Protein sequence
MNAKEFLIEL LKFKSVTPND DGALNFIAME LSDFEAFFIE KEGIKNLLLT KKFKDEGEHL 
AFGGHVDVVP AGEGWSSDAF VPMEKEGFIY ARGAQDMKSG VAAFVDAVKN ADFKGARLSL 
ILTSDEEGEA IYGTKAVLEW MQERDMLPDY AVVAEPTCVK KIGDSIKIGR RGSINGKLLI 
RGKQGHAAYP EKCINPVHDF APVLKLLAGF DLDPGSAEFS PSKIVITDIR GGMGVCNVTP 
NDLKLMFNVR NSPDTSLEDV KSYVEKICHG LNYELELKQS SEAFLTNIDN KIVQKMNESV 
QKITHEVPEL NTKGGTSDAR YFAKYGVKVV EFGVCNDRIH AIDERVSIEE FEKLCLVFKD 
LIENF