Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0914 |
Symbol | truA |
ID | 3231427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 852279 |
End bp | 853001 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637292271 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_178916 |
Protein GI | 57237668 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.992712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAATTATATT TTCTTATGAT GGCACTGCTT TTTTAGGTTC TGCTACTCAG CCTCATAAAA AAGGTGTTCA AGATGCTTTA AGTGGGGCCT TATCGCATTT GGGTATTTTT TCACCTCTTT TGATGGCTTC TCGTACAGAT AAAGGAGTAC ATGCAAGCTA TGCTGTAGCT AGTGTGGAGT GTGGAGATTA TTTTACAAAT TTAGAATATC TTCAAAAACA GCTTAATAAA TTTTCCCATC CTTTTATCCA TATCAAAAAA ATTGAAAAAG TAAAAGATGA TTTTGAAGTA AGATTTGATG TAAAAAGTAG AGAATACCGC TATATATTTT CTCACTCTTC TTATAGTCCT TTTATGGCTT CTTATGTGCA TTTTTATCCT AAATTTGACT TAGATAAGGC TAACGAGCTT TTGGGTTTTT TTGTGGGAAA AAAGGATTTA AAGTTTTTTT GCAAAAGTGG AGGAGATAAT AAAACGACTT TAAGAGAAAT TTTTATTGCT AGAGCTTATG CTTATAAAGA TTTTAGCATT TTTCATTTTA AAGCTAATGG TTTTTTAAGA GGGCAAATTA GATTAAGTGT AGCAAGTGTT TTAAAGGTTT TAGAAGGAAA AATGAGTGAA AAAGAACTCA AAGAACAGAT TGAGGCCAAA AAGCAATACA ATCACTTTTT AGCACCGCCA AATGGGCTTT ATTTAAGCCG TATATGTTAT TAA
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Protein sequence | MKIKIIFSYD GTAFLGSATQ PHKKGVQDAL SGALSHLGIF SPLLMASRTD KGVHASYAVA SVECGDYFTN LEYLQKQLNK FSHPFIHIKK IEKVKDDFEV RFDVKSREYR YIFSHSSYSP FMASYVHFYP KFDLDKANEL LGFFVGKKDL KFFCKSGGDN KTTLREIFIA RAYAYKDFSI FHFKANGFLR GQIRLSVASV LKVLEGKMSE KELKEQIEAK KQYNHFLAPP NGLYLSRICY
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