| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0808 |
|---|
| Symbol | |
|---|
| ID | 3230758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 743706 |
|---|
| End bp | 744458 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637292163 |
|---|
| Product | RNA pseudouridylate synthase family protein |
|---|
| Protein accession | YP_178812 |
|---|
| Protein GI | 57237010 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA AAGCTTATAA ACTCTTAGCT TTGCAAGAAA AAATTTCAAA TCGTGAAGCT
AAAGATTTGA TTGATAAGGG TTGTGTTTTT TCACATGGAA AAAAAGTTGT GGTTGCTAGA
GCTTTGATGA GCGATAAGGC AAGATTTAAT GTGATAAAAG CTAAAAATCC TCAAATTATT
TTTGAAGATG ATAAGATTAT TGCTATTAAT AAACCTTATG CTTATGTGAG TGAAGACTTG
GAGAAAAAAT TTAATGCCAA GCTTTTAAAT CGTTTAGACA AAGAAACAAG CGGTGTGATT
TTGCTTTGTA AAGATGAAGA TTTTAGAAAG CTTTGTATAG AAGAATTTAA AAAACACAGG
GTTTATAAAA GTTATATTGC GGTTTTAGAT GGGGTTTTGG CTGAAGAGGT TGAAGTGAAT
GAGCCTATTT TTACCATAAA AGCAAAAGGT GGGGCATTAA GTAAAGTTTC AAAAGATGGT
TTAAGTGCCT TAAGTATCAT TACTCCTATC ATGATGCAGT CAAAAAAAAC CTTAGCAAAA
ATAGTCATTC AAACAGGTAG AACTCATCAA ATCAGAGTGC ATGCTAAATT TATAAAACAT
GGCGTTGTAG GTGATGAAAA ATATGCTAAA ATTTCAAGCG ATAGAATGTA TTTACATAGT
TATGAAATTA AAATTTTTGA TTATTATTTT AAGGCTGAGC TAGATAATAG TTTTGCAAAA
GTTGGCTTTG AGATAAAAAA TTTAGATTTT TAA
|
|---|
| Protein sequence | MQEKAYKLLA LQEKISNREA KDLIDKGCVF SHGKKVVVAR ALMSDKARFN VIKAKNPQII
FEDDKIIAIN KPYAYVSEDL EKKFNAKLLN RLDKETSGVI LLCKDEDFRK LCIEEFKKHR
VYKSYIAVLD GVLAEEVEVN EPIFTIKAKG GALSKVSKDG LSALSIITPI MMQSKKTLAK
IVIQTGRTHQ IRVHAKFIKH GVVGDEKYAK ISSDRMYLHS YEIKIFDYYF KAELDNSFAK
VGFEIKNLDF
|
|---|
| |